PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010544894.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 269aa    MW: 30953.6 Da    PI: 5.2185
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010544894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1501.2e-4681363128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +GfrF+Ptd+el+++yL +k  g++++++e+i+e+ i++++PwdL++  k+++ ++k wyfFs+r +ky+++kr+nr+tk+gyWk tg+d+ ++ 
  XP_010544894.1   8 KGFRFRPTDQELIKDYLDHKNLGDETPVHEAINEIIICRFDPWDLHEqsKIQSeDDKVWYFFSPRVTKYSNSKRANRKTKNGYWKVTGRDRCIKG 102
                     7***************************9****************84245555356699************************************ PP

             NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     k+++++g+kktLvfykgr p++ +t Wvmhey+ 
  XP_010544894.1 103 KNQKVIGTKKTLVFYKGRVPNAARTAWVMHEYHS 136
                     ********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100543.5256153IPR003441NAC domain
PfamPF023651.2E-258135IPR003441NAC domain
SuperFamilySSF1019414.71E-448137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MVLKWEMKGF RFRPTDQELI KDYLDHKNLG DETPVHEAIN EIIICRFDPW DLHEQSKIQS  60
EDDKVWYFFS PRVTKYSNSK RANRKTKNGY WKVTGRDRCI KGKNQKVIGT KKTLVFYKGR  120
VPNAARTAWV MHEYHSSVVP PDKTIVLAEE TPNSVCDFGG PDTDLGLWRD ELDDGSSLSS  180
MLMTNYSLSD YSLLPEYDSP TVQLEQNNEE VWGFSADDLA SSREHGLNTF MHESPISFES  240
FYQSDLINIS EGEISPAQGN CLHQQALRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-33913518139Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010544894.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010544894.10.0PREDICTED: NAC domain-containing protein 69-like isoform X3
TrEMBLA0A151U8J72e-43A0A151U8J7_CAJCA; NAC domain-containing protein 69
STRINGXP_010544888.10.0(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.32e-39NAC transcription factor-like 9