PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010544989.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

G2-like

Protein Properties

Length: 159aa MW: 18252.6 Da PI: 7.8268

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010544989.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.1	5.2e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 ++ mk+ gLt+++v+SHLQkYRl XP_010544989.1 1 MQKMKIRGLTRNNVASHLQKYRL 23 689*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.3E-9	1	27	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence Send to blast
MQKMKIRGLT RNNVASHLQK YRLSLQRNCR FPKEIPNQRP FTETNPSASS NPSYLHDQNN 60 VVHGFLGSHV MNSAPPELSN GYITANNNTF MMNNPQPLQQ HPFVDHSVYP PPHHLPDSKS 120 MVREFANPML GGDYPELIDT MFEYGSDIFQ DVLPLQYLR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010544989.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010544989.1	1e-115	PREDICTED: putative two-component response regulator ARR19
STRING	XP_010544989.1	1e-115	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49190.1	7e-10	response regulator 19