PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010548308.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 170aa    MW: 18557.6 Da    PI: 5.9243
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010548308.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.62.7e-132886563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +r+ +NRe+ArrsR RK++ ++ L+  +++L+ eN++ +  l   ++++ k ++e+
  XP_010548308.1 28 RKRKRMLSNRESARRSRMRKQKHLDDLTAQIDQLKDENRQIATSLTVTTQLYMKIQAEN 86
                    57899**********************************99999988888888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-172488IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.532689IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-102671No hitNo description
PfamPF001704.5E-102882IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.01E-122880No hitNo description
CDDcd147021.51E-212980No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MASSSSTYRS SSPISGGSPS SAAVVDERKR KRMLSNRESA RRSRMRKQKH LDDLTAQIDQ  60
LKDENRQIAT SLTVTTQLYM KIQAENSVLN AQLSELSSRL QSLNDIIGFV SASSNSATSG  120
EIDGCGFDDR TVGINDGFYN DDGGMFSVVN PWGGSVYANQ PIMANDIIMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12748RKRKRMLSNRESARRSRMRKQK
24047RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00267DAPTransfer from AT2G18160Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010548308.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010548308.11e-122PREDICTED: bZIP transcription factor 2-like
SwissprotQ9SI153e-73BZIP2_ARATH; bZIP transcription factor 2
TrEMBLA0A3P6DCM21e-76A0A3P6DCM2_BRAOL; Uncharacterized protein
STRINGXP_010548308.11e-122(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.13e-65basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]