PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010549375.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

VOZ

Protein Properties

Length: 472aa MW: 52344.6 Da PI: 5.8286

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010549375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	433.9	2.2e-133	192	409	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 pppsaflgpkcalwdc+rpa g++w++dycs+fha+la+neg+pg++pv+rp+gi+lkdgllf+alsak++gk+vgipecegaatakspwna+el XP_010549375.1 192 PPPSAFLGPKCALWDCPRPALGFDWFHDYCSNFHAALAFNEGPPGMNPVVRPGGIGLKDGLLFSALSAKAEGKDVGIPECEGAATAKSPWNAPEL 286 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdl++legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkq+m+efgglkrsyymdpqp+++fewhlyeyein+++a+alyrlelklv XP_010549375.1 287 FDLTVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQIMNEFGGLKRSYYMDPQPLHHFEWHLYEYEINKCEACALYRLELKLV 381 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsl.adlqkklgrlta 217 d+kk++kgkvs+ds+ adlq+++g+lta XP_010549375.1 382 DGKKNSKGKVSSDSVvADLQRQMGKLTA 409 ********99538*******97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence Send to blast
MTGKRTKTSC RSAPHKLFKD KAKNRVDDLQ GMLLDLQLAR KESRSSNVTL LEEQIHQMLR 60 EWKAELNEPS PASSLQQGGT LGSFSSDICR LLQLYDDEDD ATSKLAAPKP EPLDPGLEVG 120 NTNVFQGGKS EHGFPLVDHG NDYDGTAQLE YHQYDLMQQG FEQNFNGGFN DCLGLGGEDA 180 LNISALMPTF CPPPSAFLGP KCALWDCPRP ALGFDWFHDY CSNFHAALAF NEGPPGMNPV 240 VRPGGIGLKD GLLFSALSAK AEGKDVGIPE CEGAATAKSP WNAPELFDLT VLEGETIREW 300 LFFDKPRRAF ESGNRKQRSL PDYSGRGWHE SRKQIMNEFG GLKRSYYMDP QPLHHFEWHL 360 YEYEINKCEA CALYRLELKL VDGKKNSKGK VSSDSVVADL QRQMGKLTAE FPSDNNKRCI 420 KIRPKGNGKS PDGNGYSARN TTNPTDDSKF GSGAGAEYNS YLVGNLGDYY IN

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence Send to blast

MTGKRTKTSC RSAPHKLFKD KAKNRVDDLQ GMLLDLQLAR KESRSSNVTL LEEQIHQMLR  60
EWKAELNEPS PASSLQQGGT LGSFSSDICR LLQLYDDEDD ATSKLAAPKP EPLDPGLEVG  120
NTNVFQGGKS EHGFPLVDHG NDYDGTAQLE YHQYDLMQQG FEQNFNGGFN DCLGLGGEDA  180
LNISALMPTF CPPPSAFLGP KCALWDCPRP ALGFDWFHDY CSNFHAALAF NEGPPGMNPV  240
VRPGGIGLKD GLLFSALSAK AEGKDVGIPE CEGAATAKSP WNAPELFDLT VLEGETIREW  300
LFFDKPRRAF ESGNRKQRSL PDYSGRGWHE SRKQIMNEFG GLKRSYYMDP QPLHHFEWHL  360
YEYEINKCEA CALYRLELKL VDGKKNSKGK VSSDSVVADL QRQMGKLTAE FPSDNNKRCI  420
KIRPKGNGKS PDGNGYSARN TTNPTDDSKF GSGAGAEYNS YLVGNLGDYY IN

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010549375.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010549375.1	0.0	PREDICTED: transcription factor VOZ1-like isoform X2
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1J3GRC4	0.0	A0A1J3GRC4_NOCCA; Transcription factor VOZ1
STRING	XP_010549368.1	0.0	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]