PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010549603.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family G2-like
Protein Properties Length: 140aa    MW: 15922.5 Da    PI: 10.0786
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010549603.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like673.1e-2188140151
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilel...mkvkgLtlehvkSHLQ 51 
                     k+r+ Wt +LH++F++av+ + G+ekA+Pktil++   mkv+gL++++v+SHLQ
  XP_010549603.1  88 KNRMTWTDDLHQKFLQAVNVI-GIEKAVPKTILKCmqeMKVQGLSRNNVASHLQ 140
                     78*******************.**********87622268*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011015.808146IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521726.83E-9252IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.1E-11273No hitNo description
PROSITE profilePS512949.38785140IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.0E-2085140IPR009057Homeodomain-like
SuperFamilySSF466892.33E-1386140IPR009057Homeodomain-like
TIGRFAMsTIGR015576.7E-1988140IPR006447Myb domain, plants
PfamPF002496.0E-690140IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MDLPFIIMST DHEREAVMKA MMYGACQYLV KPVNKETIAV LWQHIARKTR TRPVRPLTDQ  60
TAGSVRDKIT TRAGEEENKG EETAASKKNR MTWTDDLHQK FLQAVNVIGI EKAVPKTILK  120
CMQEMKVQGL SRNNVASHLQ
Functional Description ? help Back to Top
Source Description
UniProtPutative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010549603.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010549603.21e-102PREDICTED: putative two-component response regulator ARR19, partial
SwissprotQ9M9B94e-38ARR19_ARATH; Putative two-component response regulator ARR19
TrEMBLA0A3P6GH573e-35A0A3P6GH57_BRAOL; Uncharacterized protein
STRINGXP_010549603.11e-102(Tarenaya hassleriana)
STRINGXP_010559224.16e-99(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM15903712
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62670.13e-39response regulator 20