PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010550367.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 239aa    MW: 26365 Da    PI: 4.5825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010550367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.3e-16142188252
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52 
                     +ykGVr+++ +g+W AeI+dp+    r + +lg+f t+e+A +a+ +a+ +
  XP_010550367.1 142 KYKGVRRRP-SGKWSAEIWDPRG---RSKRWLGTFPTPEMAVRAYNEAAAA 188
                     8********.7*********943...4666*****************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.9E-10142187IPR001471AP2/ERF domain
PROSITE profilePS5103218.136142204IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-15142188IPR016177DNA-binding domain
SMARTSM003808.5E-20142205IPR001471AP2/ERF domain
CDDcd000182.01E-20142184No hitNo description
Gene3DG3DSA:3.30.730.106.0E-19142188IPR001471AP2/ERF domain
PRINTSPR003671.3E-6143154IPR001471AP2/ERF domain
PRINTSPR003671.3E-6165181IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    Send to blast
MDFPGNNPSS RKNGNLAPIP SSSSSSYPLS CTSAPFSSYF QLYDHEMIDS SRNNPSSRQN  60
ISWVPTFPDP SSSSASVGSS SSTLWSPHYM ARCEQENEIM VSAFIKVISG TACETPSPLP  120
LTAMAAPFEI MGSEEKHDGE VKYKGVRRRP SGKWSAEIWD PRGRSKRWLG TFPTPEMAVR  180
AYNEAAAAQL AAAGDRRLPE ANPPSENQTA GDNQEEDDGE GSWWQNFDVD EMRRLLEMD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010550367.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010550367.11e-177PREDICTED: putative ethylene-responsive transcription factor ERF121
STRINGXP_010550367.11e-176(Tarenaya hassleriana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67000.14e-22ERF family protein