PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010550827.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 314aa MW: 35258.4 Da PI: 5.5702

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010550827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	7.1e-16	244	293	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k +el+k+ XP_010550827.1 244 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEKLRK-QKELEKL 293 79****************************************5.5666665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.4E-14	239	292	No hit	No description
SMART	SM00338	2.9E-12	240	308	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.737	242	287	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.7E-13	244	288	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.06E-11	244	289	No hit	No description
CDD	cd14707	5.02E-23	244	293	No hit	No description
PROSITE pattern	PS00036	0	247	262	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MVDLTMGSQG EVSGNVKNSQ FEPLARQNSL YNLTLDEVQS QLGDLGKPLS SMNLDELLQN 60 VWTAEANQSS ETEPKSVINL GNHQNSSLQR QASLSLTGTL SKKTVDEVWR DIQRSNSSDE 120 NSPQVRQPTL GEITLEDFLV KAGVVSESPV EKENSGPVPG VDPNIASQFP QQQQWIQYSH 180 PSYQQSQQGI MGGYMPKQSM MAQSVQVMDA TRLDNPLMGT LSDTQMPGRK RGAPEEFIEK 240 TVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NEKLRKQKEL EKLLPETPVA 300 EPKYQLRRTS SGPL

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010550827.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010550827.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	7e-92	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A067JSZ2	1e-145	A0A067JSZ2_JATCU; Uncharacterized protein
STRING	XP_010550827.1	0.0	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1884	28	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-75	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]