PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010551151.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ERF
Protein Properties Length: 400aa    MW: 45018.3 Da    PI: 4.1825
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010551151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.23.1e-1682131154
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     sg+kGVr+++ +gr+ AeIrd +     + +r +lg+f+t eeAa a+++ ++++e
  XP_010551151.1  82 SGFKGVRRRP-WGRFSAEIRDpF-----TkRRKWLGTFDTGEEAAHAYEKSKREFE 131
                     79********.**********66.....34*******************9999887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.47E-1582131IPR016177DNA-binding domain
CDDcd000185.45E-2082123No hitNo description
PfamPF008471.7E-1082131IPR001471AP2/ERF domain
SMARTSM003803.5E-1783146IPR001471AP2/ERF domain
PROSITE profilePS5103218.58483140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-2084130IPR001471AP2/ERF domain
PRINTSPR003675.7E-88495IPR001471AP2/ERF domain
PRINTSPR003675.7E-8106122IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MMNGKRKREI DLGSTRTIRI ICNDPYATDS SSDDDEEEGG GSKRLVAEID VPILLKKWYG  60
DESDSANLPE LSEKRERRSS SSGFKGVRRR PWGRFSAEIR DPFTKRRKWL GTFDTGEEAA  120
HAYEKSKREF EQLLSLQNQT GLTKPEVNRT KSVHPQSPSP SPSPSPSPVF DSRSTSRNCT  180
DENGEVVDTC EKHDAEMKRV GFGCRDDEES IDRLLEEPKT VPSISDIFDE SIDGWEDLWS  240
DCNNLFEFDE FDFDFNLDMI EEDESLSSGN RALDMVGTDD MVEGFLETVN EDIDEKGMID  300
EHNGTTKDAK TGEKNATVDD RDKKGNGSSK KSIIKVSGSD MEEDPFDGWE NLQGLLKLDT  360
LGDGLPLDNF EDYDVLFGDA TDWMKEPPLN FGVCILSDGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187107RRRPWGRFSAEIRDPFTKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010551151.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010551151.10.0PREDICTED: ethylene-responsive transcription factor ERF117
STRINGXP_010551151.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM165471013
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49120.15e-32ERF family protein