PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010552081.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 129aa    MW: 15123 Da    PI: 5.089
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010552081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1422.1e-133796362
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
                    e ++ rr+++NRe+ArrsR RK+  ++eL     eL +eNk L +e++++ + ++++  e
  XP_010552081.1 37 EERKRRRMISNRESARRSRMRKRRHMDELWSTLMELVNENKCLMEEMNRIMESYERVVEE 96
                    567889***********************************************9987666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-102992No hitNo description
SMARTSM003381.2E-153599IPR004827Basic-leucine zipper domain
PfamPF001704.9E-113693IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.18537100IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-113990No hitNo description
PROSITE patternPS0003604257IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    Send to blast
MEGLIFNPNS LPYFQDKSSG GGNSPSSEGS SRSTAEEERK RRRMISNRES ARRSRMRKRR  60
HMDELWSTLM ELVNENKCLM EEMNRIMESY ERVVEENAKL REETSMSMKM IGDIQLDGFF  120
VDGDDIWTI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13842RKRRR
24059RRRMISNRESARRSRMRKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010552081.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010552081.11e-89PREDICTED: basic leucine zipper 8
SwissprotQ9CA466e-39BZIP8_ARATH; Basic leucine zipper 8
TrEMBLA0A178WI502e-36A0A178WI50_ARATH; BZIP
STRINGXP_010552081.15e-89(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM150351619
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68880.19e-25basic leucine-zipper 8
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]