PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010552881.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family MYB_related
Protein Properties Length: 221aa    MW: 25460.4 Da    PI: 6.9035
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010552881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.86.1e-1498142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E++l++ + k++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_010552881.1  98 PWTENEHKLFLIGLKKYGKGDWRSISRNVVVTRTPTQVASHAQKY 142
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.969151IPR017877Myb-like domain
SMARTSM007171.9E-5253IPR001005SANT/Myb domain
SuperFamilySSF466899.44E-11458IPR009057Homeodomain-like
CDDcd001679.69E-5651No hitNo description
PROSITE profilePS5129420.0591147IPR017930Myb domain
SuperFamilySSF466892.08E-1692148IPR009057Homeodomain-like
TIGRFAMsTIGR015576.8E-1794146IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.606.4E-1195141IPR009057Homeodomain-like
SMARTSM007178.7E-1095145IPR001005SANT/Myb domain
PfamPF002499.3E-1298142IPR001005SANT/Myb domain
CDDcd001674.73E-898143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MAANQWTRTE DKMFEESLVI FPETLPDRWE RIAEKLRKSP AEVREHYEAL VHDVSEIDSG  60
RVEMPDYVDD SAASWDSAPA QISFRAKHGD TEKKKGTPWT ENEHKLFLIG LKKYGKGDWR  120
SISRNVVVTR TPTQVASHAQ KYFLRQTSMK KERKRSSIHD ITITTVDNNN NNNMVAAMSG  180
PEWTWSAQPE SAQEQSPLPQ LPQSDFHGQA QFPRDQSFRF P
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010552881.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010552881.11e-166PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H74e-55DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A397ZYQ03e-99A0A397ZYQ0_BRACM; Uncharacterized protein
STRINGXP_010552881.11e-165(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM51272750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.19e-90MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]