PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010554329.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family ZF-HD
Protein Properties Length: 174aa    MW: 20329.1 Da    PI: 9.2873
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010554329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer80.22.5e-25351356
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56
                    + +Y eC++NhAa+lG++a+DGC+Ef ps      a++  CaACgCHR++HRr 
  XP_010554329.1  3 SPVYGECMRNHAARLGSYATDGCREFFPS-----AASGDICAACGCHRSYHRRL 51
                    568*************************9.....567899************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257743.0E-13350IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.6E-20550IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152321.321651IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015661.2E-16650IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Gene3DG3DSA:1.10.10.601.9E-17100171IPR009057Homeodomain-like
SuperFamilySSF466891.31E-7107170IPR009057Homeodomain-like
TIGRFAMsTIGR015653.0E-29112170IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MQSPVYGECM RNHAARLGSY ATDGCREFFP SAASGDICAA CGCHRSYHRR LHPPEIPASS  60
AGEIIPHHPR HPFTSLRRVK QLARLRREEP GPPLPPATET EEEEEEETVM MRRRRKSKFT  120
AEQREAMREY AERLGWTLRD KRSLRDEIKM FCDGIGVSRY LFKTWVNNNK RFYF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112117RRRKSK
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00143DAPTransfer from AT1G14687Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010554329.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010554329.11e-128PREDICTED: zinc-finger homeodomain protein 14
SwissprotQ9LQW32e-66ZHD14_ARATH; Zinc-finger homeodomain protein 14
TrEMBLD7KCI51e-68D7KCI5_ARALL; ATHB32
STRINGXP_010554329.11e-127(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM137282124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14687.12e-63homeobox protein 32