PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010554752.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 285aa    MW: 31369.4 Da    PI: 9.8244
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010554752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.77e-15215258548
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     +r++r++kNRe+A rsR+RK+a++ eLe k+  Le+eN++L+ e
  XP_010554752.1 215 RRQKRMIKNRESAARSRARKQAYTHELEIKISRLEEENERLRRE 258
                     79***************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.2E-14209258No hitNo description
SMARTSM003384.7E-11211268IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.461213258IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.69E-10215260No hitNo description
CDDcd147078.22E-18215245No hitNo description
PfamPF001703.0E-12215259IPR004827Basic-leucine zipper domain
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MVMGSLRGTG EEPKSQTLPR QGSLYSLTLD EVQTHLGESG RPLGSMNLDE LLKSVWSAEA  60
NQSSSAMPVN GAGHGLSRQG SLTLPGELSK KTVDEVWREI QQNKNGGSAH ERKDKQPTLG  120
EMTLEDLLLK AGVVTETIPG SDSGGNGLGQ NIPQQGPWVQ YHQLPSMPQP QAFMPYPVSE  180
MQAMVSPLMG GLSDTQAPGR KRVASGDVAE KTVERRQKRM IKNRESAARS RARKQAYTHE  240
LEIKISRLEE ENERLRREKE VEKVLPTAPP PDPKRQLRRT SSASF
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010554752.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010554752.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
SwissprotQ9LES31e-162AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLV4NE971e-162V4NE97_EUTSA; Uncharacterized protein
STRINGXP_010554752.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-149ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]