PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010555404.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bHLH
Protein Properties Length: 222aa    MW: 24882.9 Da    PI: 10.8335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010555404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-1366112354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+ +ErrRR riN  f++Lr++lP++      K +Ka++L ++v+Y+++L
  XP_010555404.1  66 KKHSDAERRRRLRINCQFATLRTILPNL-----AKQDKASVLGETVRYLNEL 112
                     68*************************7.....6***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-1456124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.30763112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-1166112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.31E-966117No hitNo description
Gene3DG3DSA:4.10.280.103.8E-1467130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-1269118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.0E-5143205No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MVLLQHLEQG IRPITRYYNP MTYSNTHASL LHGFPSTAAT SSSKLFFRNS AMKQKSKVES  60
KEIAAKKHSD AERRRRLRIN CQFATLRTIL PNLAKQDKAS VLGETVRYLN ELKKTVKDIE  120
MAAPRLEDDL KLSQCNRGLA KVVFSCSDRK GLMSEIAESL ATTKGKAVRA EIMTVGGRTK  180
CALYVQGVNG NEGMVRLKKA LKPILNRDLS KNNRITTFHQ SS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010555404.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010555405.11e-165PREDICTED: transcription factor bHLH131 isoform X1
SwissprotP0CB253e-88BH131_ARATH; Transcription factor bHLH131
TrEMBLD7M9K51e-95D7M9K5_ARALL; Predicted protein
STRINGXP_010555404.11e-164(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM139392025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.18e-84bHLH family protein