PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010556306.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family NAC
Protein Properties Length: 210aa    MW: 24211.9 Da    PI: 4.2731
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010556306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.15.1e-2161262128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                       GfrF+P+d e+v++yLk+kv g +l + +++ +v d+   +P +Lp    +++k+ yfFsk+ ++         +t s yW   g++  +l+ 
  XP_010556306.1   6 FTGFRFSPNDMEIVNHYLKRKVLGLPLCA-DFMVDVdDLAWRDPCTLP----GGDKHRYFFSKKIRNV--------VTMSRYWTPMGQEMGILDP 87 
                     68************************999.676666599999*****9....57899******98855........566779***********99 PP

             NAM  96 .kgelvglkktLvfy..kgrap...kgektdWvmheyrl 128
                      ++ +vg+++tL++   +g+ p   +  k+ W+mheyr+
  XP_010556306.1  88 vSNDVVGIRQTLALVhtDGKMPlpfNQPKSFWFMHEYRF 126
                     88889*******99955445443335569********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-263145IPR003441NAC domain
PROSITE profilePS5100529.2475145IPR003441NAC domain
PfamPF023652.6E-157125IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MEIQLFTGFR FSPNDMEIVN HYLKRKVLGL PLCADFMVDV DDLAWRDPCT LPGGDKHRYF  60
FSKKIRNVVT MSRYWTPMGQ EMGILDPVSN DVVGIRQTLA LVHTDGKMPL PFNQPKSFWF  120
MHEYRFTEMH GTGEQEWAAY HVFHKEIKTY DGINLQLHSE TDESEGSDDE ESNYGENDEE  180
ENIGDMPDFI DHIDQDEEGS GFGPPPPDSP
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010556306.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010556306.11e-157PREDICTED: NAC domain-containing protein 83-like
STRINGXP_010556306.11e-157(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18062786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56520.11e-20NAC family protein