PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010559269.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 202aa    MW: 23640.5 Da    PI: 10.2069
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010559269.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-1085141561
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                     +r +rk++NRe+ArrsR RK++ +e+ ++    L  eN++L ++l     ++++ ++
  XP_010559269.1  85 RRKKRKISNRESARRSRMRKQKHLENMRTQLNRLRIENRELTNRLRYVVYHCQRARA 141
                     799***************************************999877777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.6E-879131No hitNo description
SMARTSM003387.8E-1281145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.40483146IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.97E-985133No hitNo description
PfamPF001702.9E-785140IPR004827Basic-leucine zipper domain
CDDcd147025.81E-1786130No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MMSTIPPVFS SEPGLANPFP AFETGFTPWD GSDIFSMFNS SEDEPVETKP GFEKHTSPQT  60
QAQTNSSSGS DDKSQNRFVS DMDERRKKRK ISNRESARRS RMRKQKHLEN MRTQLNRLRI  120
ENRELTNRLR YVVYHCQRAR AENDHLWLEH RILVEKLSNM RHVSMLRRMQ QASENATWPC  180
NDSTVVTAQQ NPSMLRNHVV DF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
184105RRKKRKISNRESARRSRMRKQK
297104RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010559269.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010559269.11e-151PREDICTED: bZIP transcription factor 2
TrEMBLD7MXA72e-74D7MXA7_ARALL; Uncharacterized protein
STRINGXP_010559269.11e-150(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33382665
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.14e-56basic leucine-zipper 5