PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010904551.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

NAC

Protein Properties

Length: 452aa MW: 51414 Da PI: 4.4175

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010904551.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.1	4.7e-25	3	117	2	112
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknra...tksgyWkatgkdke 91 p Gf F+P+de+l+v yLk+k+ +++l++ ++i e+d+y +P+dL +++ a+++ ew+fF+++ +k++ ++++ra + g+Wkat k+ XP_010904551.1 3 PLGFSFRPSDEDLLVTYLKEKLFQRPLPC-DIIVEADVYGNHPKDLAwQNIMANREfEWFFFTSTTRKHPGASETSRAsrrAGLGRWKATKGVKT 96 89*************************.99**********86555444445********96655555411166899***** PP NAM 92 vlskkgelvglkktLvfykgr 112 vl+++++++g k+++ + +++ XP_010904551.1 97 VLDSENNAIGSKQSFCYMEQN 117 **************99654 PP
2	NAM	96.4	4.4e-30	123	255	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra...tksgyWkatgkdk 90 +ppGf F+Ptdeel++++Lk+k+ +++l++ ++ike+d+y +P++ + ++++++ ew+fF+ + +k++ k+++ra + +g+Wk+ + k XP_010904551.1 123 VPPGFIFQPTDEELLDFFLKEKLLHQPLQC-DIIKEADVYGNHPSNVTiQfAMANRNFEWFFFTWTTRKHPDAKQSKRAcrvAGQGRWKSNQSVK 216 69**************************.99**********84335555555*******996665555412277******* PP NAM 91 evlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 +vl+++g+++g ++ + + + + k ek+ W+m+ey++ XP_010904551.1 217 PVLNEEGQVIGSRQNFSYMERtPSGKEEKSIWLMEEYSI 255 **************95323445569******86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-27	2	118	IPR003441	NAC domain
PROSITE profile	PS51005	19.074	2	115	IPR003441	NAC domain
Pfam	PF02365	2.8E-11	3	114	IPR003441	NAC domain
SuperFamily	SSF101941	7.32E-35	121	284	IPR003441	NAC domain
PROSITE profile	PS51005	36.521	123	284	IPR003441	NAC domain
Pfam	PF02365	1.1E-16	124	255	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence Send to blast
MVPLGFSFRP SDEDLLVTYL KEKLFQRPLP CDIIVEADVY GNHPKDLAWQ NIMANREFEW 60 FFFTSTTRKH PGASETSRAS RRAGLGRWKA TKGVKTVLDS ENNAIGSKQS FCYMEQNPAC 120 MMVPPGFIFQ PTDEELLDFF LKEKLLHQPL QCDIIKEADV YGNHPSNVTI QFAMANRNFE 180 WFFFTWTTRK HPDAKQSKRA CRVAGQGRWK SNQSVKPVLN EEGQVIGSRQ NFSYMERTPS 240 GKEEKSIWLM EEYSIQNLRK GGDAAMPMDQ NRLDDWVICK IYLTPCARKE LSGEDVPTME 300 VPEIENQPLM LPSQDCLISQ LPSDTLPQLN HALDREVESC PCMLPDSSLQ HPTLDDINEF 360 LESLPMDEFL QQTAYAPDTL PQLTDALDQE AESCAGVLHD SSLQSPTSDE IDEFLESLPI 420 DEFLQQIANA PDESPGIDQH DKKCLPPPQL LD

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence Send to blast

MVPLGFSFRP SDEDLLVTYL KEKLFQRPLP CDIIVEADVY GNHPKDLAWQ NIMANREFEW  60
FFFTSTTRKH PGASETSRAS RRAGLGRWKA TKGVKTVLDS ENNAIGSKQS FCYMEQNPAC  120
MMVPPGFIFQ PTDEELLDFF LKEKLLHQPL QCDIIKEADV YGNHPSNVTI QFAMANRNFE  180
WFFFTWTTRK HPDAKQSKRA CRVAGQGRWK SNQSVKPVLN EEGQVIGSRQ NFSYMERTPS  240
GKEEKSIWLM EEYSIQNLRK GGDAAMPMDQ NRLDDWVICK IYLTPCARKE LSGEDVPTME  300
VPEIENQPLM LPSQDCLISQ LPSDTLPQLN HALDREVESC PCMLPDSSLQ HPTLDDINEF  360
LESLPMDEFL QQTAYAPDTL PQLTDALDQE AESCAGVLHD SSLQSPTSDE IDEFLESLPI  420
DEFLQQIANA PDESPGIDQH DKKCLPPPQL LD

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-20	2	282	11	166	Stress-induced transcription factor NAC1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029116688.1	0.0	NAC domain-containing protein 60-like
TrEMBL	A0A3Q0HWS3	1e-54	A0A3Q0HWS3_PHODC; NAC domain-containing protein 30-like
STRING	XP_008793755.1	1e-119	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP29404	2	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-19	NAC domain containing protein 28