PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010904691.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 429aa    MW: 47290.1 Da    PI: 7.7323
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010904691.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11e-09144184545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_010904691.1 144 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 184
                     7889************************9877777766555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-7133187No hitNo description
SMARTSM003389.4E-8140203IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.438142186IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-7144187No hitNo description
PfamPF001709.9E-7144184IPR004827Basic-leucine zipper domain
PROSITE patternPS000360147162IPR004827Basic-leucine zipper domain
PfamPF141445.6E-34226301IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MHASRVSDLA ALEQSIGFRI EEAVDLSRNP LFNPKSSGQS IASDPLQFGA YSKALPSTDI  60
SPASARVGPL TVPQQKGQQP NLVSSSSGHI ENWGESTMAD TSPRTDTSTD VDTDDKNQRL  120
EQGQAAIAAA SDSSDKSKDK LDQKTLRRLA QNREAARKSR LRKKAYVQQL ENSRLKLTQL  180
EQELQRARQQ GIFISSSGDQ SHSMGGNGAL AFDMEYARWL EEHNRQINEL RAAVNSHASD  240
NDLRTIVDSI MAHYDEIFRL KGVAAKADVF HMLSGMWKTP AERCFLWLGG FRSSELLKLL  300
ANQLEPLTEQ QLVGICNLQQ SSQQAEDALS QGMEALQQSL AETLASGSLG PAGSSGNVAN  360
YMGQMAMAMG KLGTLESFLR QADNLRQQTL QQMIRILTTR QSARALLAIH DYFSRLRALS  420
SLWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019701724.20.0transcription factor TGA2.3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2H3XPH40.0A0A2H3XPH4_PHODC; transcription factor TGA2.3-like isoform X2
STRINGXP_008786823.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-147bZIP family protein