PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010904748.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 168aa    MW: 19629.5 Da    PI: 10.5698
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010904748.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.54e-1741289127
             NAM   9 PtdeelvveyLkkkvegkk.........leleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     P+++e+vv  +   + ++k          +++  +   ++ ++ Pw+ ++   ++++ ++ wyfF++r+++ +  +  +r t +g W+  gk+ke
  XP_010904748.1   4 PQNQEMVVMKMMSIMVSQKarlsmrpsrQRMSPKMVPPGMSSTVPWEKERtgtQHRNVNDGWYFFTQREREGE--NIFKRETGNGSWRPVGKEKE 96 
                     5666665554444444444243333222222113444478888899987433333334459*******99865..58999*************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     ++++++ l+g k++L ++    ++g++t+W+++ey+
  XP_010904748.1  97 IVVENEGLIGYKRSLEYF----SEGKRTEWLLKEYS 128
                     ******************....7999*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.3971156IPR003441NAC domain
PfamPF023653.5E-104128IPR003441NAC domain
SuperFamilySSF1019411.05E-1562156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MAVPQNQEMV VMKMMSIMVS QKARLSMRPS RQRMSPKMVP PGMSSTVPWE KERTGTQHRN  60
VNDGWYFFTQ REREGENIFK RETGNGSWRP VGKEKEIVVE NEGLIGYKRS LEYFSEGKRT  120
EWLLKEYSST LESQQPVNPQ SDPKLTDTVI CRFYRRPRPR GTGTIPRP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010904748.11e-121NAC domain-containing protein 2-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-11NAC domain containing protein 58