PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010904865.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bHLH

Protein Properties

Length: 220aa MW: 23603.6 Da PI: 12.2513

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010904865.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00051	153	187	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++++ L +l+P + +Kls + Le+A +Y+ L XP_010904865.1 153 KVRDRLRVLARLVPGC-----RKLSAPSLLEEAADYVAAL 187 7899999******9.....8************9877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.036	138	187	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	6.8E-8	152	207	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.1E-7	153	201	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence Send to blast
MQTAEPTSVS LFITSSSLPP LLPTMISSSS PSSSSASGSR KKPRPGPIPR PQTKWRTGAQ 60 ERIYRRRLLE ALRSARVCTG GGGARAVKEA ADSALALTAR GQSRWSRAIL FGRCRRRKLL 120 LKAGGKVRRR QQPRPVRKAP SPPPPPAALK GKKVRDRLRV LARLVPGCRK LSAPSLLEEA 180 ADYVAALEMQ VKAMRALADA LSAAALSSPP LPAAIPEPEN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010904865.1	1e-149	transcription factor bHLH149-like
TrEMBL	A0A2H3X7A3	2e-87	A0A2H3X7A3_PHODC; transcription factor bHLH149-like
STRING	XP_008779352.1	3e-88	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1658	5	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06590.2	2e-13	bHLH family protein