PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010906173.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 175aa    MW: 20027.8 Da    PI: 10.3839
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010906173.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.74.9e-19210234128
             NAM  34 ikevdiykvePwdLpk..kvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkg..ektdW 121
                     i e+d+y  +P++L +  +++++++ewyfF+++ +k++    +++++r + +g+Wka  + k+vl++++++ g k+ + + +   p+g  +kt+W
  XP_010906173.1   2 IVEADVYGDDPKNLTAqySMANRDREWYFFTSTTRKHPgasDSSQASRRAGAGRWKARQRIKTVLDSDHKVLGSKQCFCYRER-CPSGgeTKTTW 95 
                     7899**********84346777899***********9955546688888899***************************9854.44442269*** PP

             NAM 122 vmheyrl 128
                     +m+ey++
  XP_010906173.1  96 LMEEYSI 102
                     *****86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100528.4191131IPR003441NAC domain
SuperFamilySSF1019413.14E-252131IPR003441NAC domain
PfamPF023651.0E-820102IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MIVEADVYGD DPKNLTAQYS MANRDREWYF FTSTTRKHPG ASDSSQASRR AGAGRWKARQ  60
RIKTVLDSDH KVLGSKQCFC YRERCPSGGE TKTTWLMEEY SIPDLRRKAG ASGINGSNKL  120
DEWVICKIYL TPKARKVHTT PKAREDQPVE KVAPEPAAKR RRMKEPQTMK FTLKN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-18112948163NO APICAL MERISTEM PROTEIN
1ut4_B2e-18112948163NO APICAL MERISTEM PROTEIN
1ut7_A2e-18112948163NO APICAL MERISTEM PROTEIN
1ut7_B2e-18112948163NO APICAL MERISTEM PROTEIN
4dul_A2e-18112948163NAC domain-containing protein 19
4dul_B2e-18112948163NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010906173.21e-130NAC domain-containing protein 68
TrEMBLA0A3Q0HWS32e-40A0A3Q0HWS3_PHODC; NAC domain-containing protein 30-like
STRINGXP_008802265.12e-74(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2291725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.14e-20NAC domain containing protein 3