PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010906869.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 551aa    MW: 59405.1 Da    PI: 6.1177
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010906869.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.43.8e-30216272259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vk+se++rsYY+Ct ++C++kkkver+  d++vvei+Y+g+Hnh+
  XP_010906869.1 216 SDGYNWRKYGQKQVKSSENSRSYYKCTNTSCCAKKKVERCP-DGRVVEIIYRGQHNHD 272
                     7****************************************.***************7 PP
2WRKY103.71e-32387444259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vkg+++prsYYrCt++gCpv+k+ve++++d k++++tYeg+Hnhe
  XP_010906869.1 387 SDGYRWRKYGQKIVKGNPNPRSYYRCTHNGCPVRKHVEKASDDAKAMIMTYEGKHNHE 444
                     8********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-26207274IPR003657WRKY domain
PROSITE profilePS5081122.802210274IPR003657WRKY domain
SuperFamilySSF1182901.24E-23212274IPR003657WRKY domain
SMARTSM007742.1E-32215273IPR003657WRKY domain
PfamPF031063.2E-22217272IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.6E-34371446IPR003657WRKY domain
SuperFamilySSF1182904.45E-27380446IPR003657WRKY domain
PROSITE profilePS5081133.981381446IPR003657WRKY domain
SMARTSM007745.9E-37386445IPR003657WRKY domain
PfamPF031063.4E-26388444IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    Send to blast
MAEKRPSSDA QSEEKRDATG GRPPSPPPMV ESSPPAKPGA DASPAEKEDG SEAVEPPNST  60
ARENPVAGEA DGRPFSQLLA GPMASPVGSP RATPILAVPV DAMRLPMVAV PCFLAPAALL  120
ESPRFSGQFA MTHQAALATV TAQAQMQLQA AYPSSSSELV STSVPQTMLS NISPVSFQQR  180
PPTVCQDSVC MPETEQLPSS DQKPQSSHIV AKTAISDGYN WRKYGQKQVK SSENSRSYYK  240
CTNTSCCAKK KVERCPDGRV VEIIYRGQHN HDPPQKTKCS KERGTQSVVP NGDNETLEHP  300
SSEINESDPS TCKTEQISGN ETPERQLYCS SDCEGDAGIK TAEDTGEEPD PKRRLVESMM  360
HISTPVLRTV REPKIVVQKA CDVGHVSDGY RWRKYGQKIV KGNPNPRSYY RCTHNGCPVR  420
KHVEKASDDA KAMIMTYEGK HNHEPPTPQN TSDSPGAALI TAATADTDEQ RNKSDSLLDQ  480
KPSKEMRPDV GGDLSGERAI ELGGEKALES AQTLLSIGFN SASGEATRTN SESVKHPLFS  540
ENPAAVPVQN S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-27215446877Probable WRKY transcription factor 4
2lex_A3e-27215446877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010906869.10.0probable WRKY transcription factor 4
TrEMBLA0A2H3X0H10.0A0A2H3X0H1_PHODC; probable WRKY transcription factor 4
STRINGXP_008776488.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-75WRKY DNA-binding protein 32