PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907391.1
Common NameZFP
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 244aa    MW: 25537.6 Da    PI: 7.9119
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907391.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.0005595117123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC+ Cgk F +   L  H  +H
  XP_010907391.1  95 YKCSVCGKAFGSYQALGGHKASH 117
                     9*********9999998888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.01295117IPR015880Zinc finger, C2H2-like
PfamPF139126.5E-1395119IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.0E-495117IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.63795117IPR007087Zinc finger, C2H2
SuperFamilySSF576671.7E-895117No hitNo description
PROSITE patternPS00028097117IPR007087Zinc finger, C2H2
SuperFamilySSF576671.7E-8145172No hitNo description
PfamPF139125.3E-12149174IPR007087Zinc finger, C2H2
SMARTSM003550.25150172IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.642150172IPR007087Zinc finger, C2H2
PROSITE patternPS000280152172IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009644Biological Processresponse to high light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010117Biological Processphotoprotection
GO:0010200Biological Processresponse to chitin
GO:0015979Biological Processphotosynthesis
GO:0035264Biological Processmulticellular organism growth
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MAVDAVETTA ASVHPPTTHE MSDEELPHLE GWAKRKRSKR HHRYFDHPPT EEEYLALCLV  60
MLARGGSGHG LPPLNSGSAA TATVAAPVPE EKLSYKCSVC GKAFGSYQAL GGHKASHRKL  120
TAAGEDSTTS PAASASGSST AVASSSGRVH QCSVCLKIFP SGQALGGHKR RHYEGNLGGS  180
AASAANGGAA SMSEGAGSSD RGFDLNLPPV LEFTFDAARR CVVKEEEEVQ SPLAFKKPRF  240
LIPA
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00162DAPTransfer from AT1G27730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907391.11e-178zinc finger protein ZAT10
TrEMBLK0A0J91e-177K0A0J9_ELAGV; Zinc-finger protein (Fragment)
STRINGXP_008792675.11e-126(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP102236113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-47salt tolerance zinc finger