PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010907516.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 302aa MW: 32750.5 Da PI: 8.0033

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010907516.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	128.3	2.3e-40	45	106	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +e+alkcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss XP_010907516.1 45 PEQALKCPRCDSNNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 106 6899******************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-25	38	98	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.1E-33	47	103	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.497	49	103	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	51	87	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence Send to blast
MEISNAHQQV MATLPLEEVL AGCPKTQQPQ QQQQQQQERK ARPPPEQALK CPRCDSNNTK 60 FCYYNNYSLS QPRYFCKGCR RYWTKGGSLR NVPVGGGCRK NKRSSSSTSK RVQDQTLTTH 120 STPPLPTFIP PPLSYDPSGL SLTFPRFHTP PTPGQLGLDD HDSFLLGNPN PNPSQIPTAT 180 PSFLDILRGG LLDTTTNSNA FHNLYHGFGG HGRMEEVEGG VSGEEVVLPF DGGLGGSTTS 240 TTASTPTASQ GSCKAVDGGE SRVFMGLQWQ VGRDGSMGMD PGREYWNGVG SSWPGLINSS 300 LM

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010907516.1	0.0	dof zinc finger protein DOF3.2 isoform X1
TrEMBL	A0A2H3XUN0	1e-174	A0A2H3XUN0_PHODC; dof zinc finger protein DOF3.2-like isoform X1
STRING	XP_008789033.1	1e-175	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4704	32	63

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	1e-32	Dof family protein