PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907869.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 336aa    MW: 38033.5 Da    PI: 9.8043
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907869.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.91.9e-3259112255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     prlrWtpeLH +Fv+ave+LGG+++AtPk +lelmkvkgL+++hvkSHLQ+YR+
  XP_010907869.1  59 PRLRWTPELHLCFVQAVERLGGQDRATPKMVLELMKVKGLSIAHVKSHLQMYRS 112
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.90755115IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-3055113IPR009057Homeodomain-like
SuperFamilySSF466896.63E-1656113IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-2558114IPR006447Myb domain, plants
PfamPF002491.0E-860111IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MRSMSSESSR GRPSKVGEVE EDGEDNLRNG GSSSNSTVEE SERKPSSGTV RQYVRSKNPR  60
LRWTPELHLC FVQAVERLGG QDRATPKMVL ELMKVKGLSI AHVKSHLQMY RSKKIDESGQ  120
VIADPWSVMK GTKQHIYNLG HLPMLHGCHQ RPTIPNLRSD GSSWFGHRNW TQNPVLSRAM  180
NSTVGSRSHG SINEMIFRGS DRLKSNQDFH INTSSSNHQA ICELREATGE SHLLHNCRLG  240
TTQYQAEERG AYLQERGLTG PEGQSSERWK ANDQGPDLNL SLHIGPRQEK KQQRRWEEEL  300
ESSLSLSLFG PSRMERCSRD VEKGLKSWHV GGRSWQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-1960114458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907869.10.0transcription activator GLK2 isoform X4
TrEMBLA0A3Q0HQN81e-160A0A3Q0HQN8_PHODC; transcription repressor KAN1-like isoform X1
STRINGGSMUA_Achr7P22410_0011e-82(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-44G2-like family protein