PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010908027.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family G2-like
Protein Properties Length: 343aa    MW: 37620.2 Da    PI: 8.7486
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010908027.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.26.7e-32132185255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  XP_010908027.1 132 PRMRWTSTLHAHFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 185
                     9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.67E-15129186IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-28130186IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-23132185IPR006447Myb domain, plants
PfamPF002496.0E-7133184IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MTAGTTSTAS ALTAFPDLSL QISPPAISME GSIRRAFFGD HNSISDSGSS GSNSSHDRHG  60
LLHSEGVQEP GHGEPTLSLG FEIPTLDPPR HQLHQNLHHH HHHHHQLHHP QIYGLKRNSR  120
SLHGGKRSMR APRMRWTSTL HAHFVHAVEL LGGHERATPK SVLELMNVKD LTLAHVKSHL  180
QMYRTVKSTD RGAGQGQTDM GMNQRTGGMG EVEGGLSCDK AGISPSYSLS SPTPPTPLPK  240
SPRGLYSSTK ENSWNASMQQ NRYLKCDNLL NKNQAVGEVG EAIHLSPRLC EQGTNTRTSF  300
SPYPRPAAAK LHMLPNLEIT LGRQSWQMEC VESSNELTLL NCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-16133187357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-16133187357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-16133187357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-16133187357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-16133187458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010908027.10.0probable transcription factor KAN4
TrEMBLA0A2H3Y2U20.0A0A2H3Y2U2_PHODC; probable transcription factor KAN4
STRINGXP_008792614.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP65543750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.15e-53G2-like family protein