PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010908290.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 357aa    MW: 40234.6 Da    PI: 9.1888
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010908290.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.21.7e-49221472128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++
  XP_010908290.1  22 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAEN 115
                     79***************************.89***************8778899***************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +glkktLvfy+g+apkg +++W+m+eyrl
  XP_010908290.1 116 HRSIGLKKTLVFYSGKAPKGIRSSWIMNEYRL 147
                     ******************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100555.42621168IPR003441NAC domain
SuperFamilySSF1019417.45E-5621167IPR003441NAC domain
PfamPF023651.2E-2423147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MAIIAAMSAN DGKDDHEHDL VMPGFRFHPT EEELIEFYLR RKVEGKRFNV ELITFLDLYR  60
YDPWELPALA AIGEKEWFFY VPRDRKYRNG DRPNRVTTSG YWKATGADRM IRAENHRSIG  120
LKKTLVFYSG KAPKGIRSSW IMNEYRLPQN ETNRYQKTEI SLCRVYKRAG VDDHCPQGLL  180
PSKASSSRGT GPDKRHSSSH QPPPSFQTFA GNISSPMMEK AHKMGGGSNA HMSAPPPHKP  240
TLYGSTASVA SLSSTTSTEE DGTTIHPKNM NALIPTCSLL TSATSSMASP TMDELMNRLV  300
GCNQNYTNQQ PNQFLPLPPQ PQLLPLNTLP VSFPTISDKL WEWNPLHEVA RDYTSFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-542316819165NO APICAL MERISTEM PROTEIN
1ut4_B1e-542316819165NO APICAL MERISTEM PROTEIN
1ut7_A1e-542316819165NO APICAL MERISTEM PROTEIN
1ut7_B1e-542316819165NO APICAL MERISTEM PROTEIN
3swm_A2e-542316822168NAC domain-containing protein 19
3swm_B2e-542316822168NAC domain-containing protein 19
3swm_C2e-542316822168NAC domain-containing protein 19
3swm_D2e-542316822168NAC domain-containing protein 19
3swp_A2e-542316822168NAC domain-containing protein 19
3swp_B2e-542316822168NAC domain-containing protein 19
3swp_C2e-542316822168NAC domain-containing protein 19
3swp_D2e-542316822168NAC domain-containing protein 19
4dul_A1e-542316819165NAC domain-containing protein 19
4dul_B1e-542316819165NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010908290.10.0NAC domain-containing protein 35
TrEMBLA0A2H3XT200.0A0A2H3XT20_PHODC; NAC domain-containing protein 35-like
STRINGXP_008788351.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP77063650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-102NAC domain containing protein 35