PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010908967.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 429aa    MW: 47049 Da    PI: 8.8572
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010908967.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.36.5e-33146202360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh+k
  XP_010908967.1 146 DGYNWRKYGQKQVKGSECPRSYYKCTHPNCPVKKKVERSF-DGQIAEIVYKGEHNHPK 202
                     9***************************************.***************85 PP
2WRKY94.76.6e-30346402359
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++WrKYGqK+vkg+ +prsYYrCt+++C+v+k ve++++d   +++tYeg+Hnh 
  XP_010908967.1 346 DGFHWRKYGQKVVKGNLYPRSYYRCTTPNCNVRKYVEKASDDSGSFVTTYEGKHNHA 402
                     9*******************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-29141203IPR003657WRKY domain
SuperFamilySSF1182909.15E-26143203IPR003657WRKY domain
SMARTSM007747.7E-37144202IPR003657WRKY domain
PfamPF031061.1E-25146201IPR003657WRKY domain
PROSITE profilePS5081123.617146203IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.4E-31330404IPR003657WRKY domain
SuperFamilySSF1182901.44E-27337404IPR003657WRKY domain
PROSITE profilePS5081130.515339404IPR003657WRKY domain
SMARTSM007741.9E-34344403IPR003657WRKY domain
PfamPF031068.2E-24346401IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MQDAEKIVVA KPVASRPYSN LRSFSELLAD AMNASPVTSF AEATVTIRPK TVRFKPSPNA  60
ALAEVSSLGN FDAGHQNPAT DVQAPVHVIG QEKHQFQLQP TLSCQQNSFS HIDMNHIYKP  120
SNSVPESTEQ DTRKQPATGG DRPSYDGYNW RKYGQKQVKG SECPRSYYKC THPNCPVKKK  180
VERSFDGQIA EIVYKGEHNH PKPQPPKRLS SGSQGQTVVS EGHGKESDNP LRSHHLVWGN  240
VSDGQVEKGI EISLPDTTSF LGKAYFSHDP PFATSYNSVA RNPDSAGRLS GASEFGNATA  300
SIDNDKPNYN RRKNENQVSG AGAVMEGVAE PHSATQTMVE SDVSGDGFHW RKYGQKVVKG  360
NLYPRSYYRC TTPNCNVRKY VEKASDDSGS FVTTYEGKHN HALPAKKTNL AASDPDAVAL  420
NNSRHNLNT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-28146405678Probable WRKY transcription factor 4
2lex_A1e-28146405678Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010908966.10.0WRKY transcription factor 44 isoform X2
RefseqXP_010908967.10.0WRKY transcription factor 44 isoform X2
TrEMBLA0A2H3ZI950.0A0A2H3ZI95_PHODC; WRKY transcription factor 44 isoform X1
STRINGXP_008776094.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.11e-90WRKY family protein