PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909260.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 387aa    MW: 42826.9 Da    PI: 10.0531
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909260.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-20191239355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  XP_010909260.1 191 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDMAAYTLRG 239
                     8******9.**********955...5***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.47E-23189249No hitNo description
SuperFamilySSF541711.9E-22190248IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-31190248IPR001471AP2/ERF domain
SMARTSM003806.1E-37190253IPR001471AP2/ERF domain
PROSITE profilePS5103222.642190247IPR001471AP2/ERF domain
PfamPF008476.6E-14191239IPR001471AP2/ERF domain
PRINTSPR003675.9E-11191202IPR001471AP2/ERF domain
PRINTSPR003675.9E-11213229IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MEDRLPSSDC SGINAVMVMP PDSHHHHRRR RCHHRHHFPR SSNTSILNFL DPKAKRLAES  60
PMELNSMPNV SQVVPPPSCF SSSGNSSSSY PPMASKPPPF TIFLQKEAIV EPSTLLSPRR  120
IPLSSADLHI NLQMYQKLEK PEGLQLHHLH HQGSINSLSS SALETSTKGI RGGSTAASSL  180
QRQQLHQAKL FRGVRQRHWG KWVAEIRLPR NRTRVWLGTF DTAEEAAMAY DMAAYTLRGD  240
LAHLNFPHLK HQLSNIASES GHPHAATASL LEAKLKAFRN SSSAFPSLTS NQPKQLPEKD  300
LLRMCLGGEC IPPVKKRKKS GIDEEAASTA ITRPWSKKEP SDAGGRKMVQ QELLTLAGDV  360
DGVLLSRMPS LDMDMIWDSL PIAAADS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-191912561581Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314318KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909260.10.0ethylene-responsive transcription factor RAP2-4
TrEMBLA0A2H3X5M41e-163A0A2H3X5M4_PHODC; ethylene-responsive transcription factor ERF062-like
STRINGXP_008778713.11e-169(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2292046
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-34ERF family protein