PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010909355.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

Dof

Protein Properties

Length: 342aa MW: 36381.5 Da PI: 8.1512

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010909355.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	4.9e-40	32	92	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvPvGgg+rknkks+ XP_010909355.1 32 PEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKKSK 92 67899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	4.5E-33	34	90	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	3.0E-27	35	90	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.534	36	90	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	38	74	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence Send to blast
MVSPAADDSQ TSGGRKTAAA ATTTTTNPLH PPEQGLKCPR CDSPNTKFCY YNNYSLTQPR 60 HFCKTCRRYW TKGGALRNVP VGGGCRKNKK SKSSASTRLP LDPADPIVGI PEHGSALKFL 120 TGPSQPAVDF QLGVLPFSRL QLPTTSGVFS SSNNQFFSFA DFPSATAISS PAVTTASSMV 180 GFSYPISSVG LYGEMGGGLS SMVSSNTHSS IASSIESLSS INQDLHWKLQ QQRLAMLFGV 240 EAHKESTLSA LPTPLLEKQP EPIAFQLPDC TRAEDCGGSG SRSGCVGTTE TAAWFHESSY 300 TMPASATNNS RDNNTSSSGN NNSSNWNGIP AWNDMPQFTT LP

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence Send to blast

MVSPAADDSQ TSGGRKTAAA ATTTTTNPLH PPEQGLKCPR CDSPNTKFCY YNNYSLTQPR  60
HFCKTCRRYW TKGGALRNVP VGGGCRKNKK SKSSASTRLP LDPADPIVGI PEHGSALKFL  120
TGPSQPAVDF QLGVLPFSRL QLPTTSGVFS SSNNQFFSFA DFPSATAISS PAVTTASSMV  180
GFSYPISSVG LYGEMGGGLS SMVSSNTHSS IASSIESLSS INQDLHWKLQ QQRLAMLFGV  240
EAHKESTLSA LPTPLLEKQP EPIAFQLPDC TRAEDCGGSG SRSGCVGTTE TAAWFHESSY  300
TMPASATNNS RDNNTSSSGN NNSSNWNGIP AWNDMPQFTT LP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010909355.2	0.0	dof zinc finger protein DOF5.7-like
TrEMBL	A0A2H3Z9I3	1e-166	A0A2H3Z9I3_PHODC; dof zinc finger protein DOF5.7
STRING	XP_008810154.1	1e-167	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-46	Dof family protein