PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909834.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 942aa    MW: 105519 Da    PI: 6.4002
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909834.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1162.48.3e-51131274117
            CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                     e ++rwlk+ e++ iL+n+e+++lt++++ +p+sgsl+L+nr+++r+fr+DG+ w+kk +g+t  E+he+LKv ++evl cyYa++e+n+ fqrr
  XP_010909834.1  13 EaQTRWLKPIEVLFILQNYESFQLTHKPPLKPPSGSLFLFNRRVLRNFRNDGHLWRKKSNGRTLAEAHERLKVANIEVLACYYARGEQNQCFQRR 107
                     5599******************************************************************************************* PP

            CG-1  98 cywlLeeelekivlvhylev 117
                     +yw+L+ ++e+iv+vhy+ev
  XP_010909834.1 108 VYWMLDPTYEHIVFVHYREV 127
                     ******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143771.5137133IPR005559CG-1 DNA-binding domain
SMARTSM010764.1E-6410128IPR005559CG-1 DNA-binding domain
PfamPF038592.4E-4513126IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.46E-13388471IPR014756Immunoglobulin E-set
CDDcd002042.15E-13558680No hitNo description
Gene3DG3DSA:1.25.40.209.0E-16585684IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.64E-16585686IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.149588680IPR020683Ankyrin repeat-containing domain
PfamPF127969.2E-8611682IPR020683Ankyrin repeat-containing domain
SMARTSM002481.9E-4621650IPR002110Ankyrin repeat
PROSITE profilePS5008811.487621653IPR002110Ankyrin repeat
SMARTSM002481100660690IPR002110Ankyrin repeat
SuperFamilySSF525408.5E-5738829IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001587739761IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.474740769IPR000048IQ motif, EF-hand binding site
SMARTSM000156.9781803IPR000048IQ motif, EF-hand binding site
SMARTSM000150.13804826IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.956805830IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 942 aa     Download sequence    Send to blast
MQPGFDINKL RREAQTRWLK PIEVLFILQN YESFQLTHKP PLKPPSGSLF LFNRRVLRNF  60
RNDGHLWRKK SNGRTLAEAH ERLKVANIEV LACYYARGEQ NQCFQRRVYW MLDPTYEHIV  120
FVHYREVAEG TFVEPIFRFS TESSPTCNQS NGITDAQVQG FPSQINDLNE GCQNSSSPVS  180
VEEVSSEFVA GKTERPYLDR MDRSETYNQP LLPDVSQALR KLEEQLSLDD DNGGGGDIYS  240
KEKLHPNCNQ NQESEHLGLL NYETRDLSQE TLDSLFDQFK HEASGYVEEA GLQDGSSTIQ  300
IVKTPECSGW SHTLLNSTSD QNSFRGDSGL PTHGKDKNIH GLETVLLDEN AVYSSSAFSG  360
IWLEQSPLKT PLATDSGLPV AQKPWFSICE ISPEWAFSFE STKVIIVADF LCNPSGHSWG  420
ILFGDTKVPL EIVQEGVFRC LTPKHDTGKV KLCITSGNGE PCSDVREFEF RSKPGTSSFS  480
STLHKADTMK STEELLLLVK FVEILLLGHQ SASVLQEGGV ESYFDPSRKL KINEDRFGEI  540
AESLQTGRDT PTNTIDRIVQ ELLKDKLQLW LSSKRVGNSD QICVLSKQEQ CIIHMISGLG  600
YDWALSPILN SGIGINFRDP NGWTALHWAA HFGREEMVAA LLAAGASTGA VTDPTSQDPV  660
GKTPASLAAA NGHKGLAGYL SEAALTNHHF SLVTGKSEIS KESGSAEAGV ETISQKSAHL  720
QGGTEDQLSL RDSLEAVRNA AQAAARIQFA FRAYSFRKKH QHAATNQDKY GLSPEDIHGI  780
KFHKAALSIQ KNYWCWKGRK EFLTLRKHVV KIQARVRAHQ ARKKYELLLT VSILEKIILR  840
WSRRGVGLRG YRAEAESIDE EEEPDILEIF RKKKVYAALD EAVSRVLSLV DSPKAQQQYR  900
RMLERYSKAK ADLSKVETAT ASVTDDCESP QIEDYFDQSA WN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909834.10.0calmodulin-binding transcription activator 4 isoform X1
RefseqXP_010909835.10.0calmodulin-binding transcription activator 4 isoform X1
TrEMBLA0A2H3XYR10.0A0A2H3XYR1_PHODC; calmodulin-binding transcription activator 4-like isoform X2
STRINGXP_008790758.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62383241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-140Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains