PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909837.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 908aa    MW: 101977 Da    PI: 6.5147
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909837.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1162.57.8e-51131274117
            CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                     e ++rwlk+ e++ iL+n+e+++lt++++ +p+sgsl+L+nr+++r+fr+DG+ w+kk +g+t  E+he+LKv ++evl cyYa++e+n+ fqrr
  XP_010909837.1  13 EaQTRWLKPIEVLFILQNYESFQLTHKPPLKPPSGSLFLFNRRVLRNFRNDGHLWRKKSNGRTLAEAHERLKVANIEVLACYYARGEQNQCFQRR 107
                     5599******************************************************************************************* PP

            CG-1  98 cywlLeeelekivlvhylev 117
                     +yw+L+ ++e+iv+vhy+ev
  XP_010909837.1 108 VYWMLDPTYEHIVFVHYREV 127
                     ******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143771.5137133IPR005559CG-1 DNA-binding domain
SMARTSM010764.1E-6410128IPR005559CG-1 DNA-binding domain
PfamPF038592.3E-4513126IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.38E-13354437IPR014756Immunoglobulin E-set
CDDcd002042.04E-13524646No hitNo description
SuperFamilySSF484032.49E-16551652IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.209.7E-16551650IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.149554646IPR020683Ankyrin repeat-containing domain
PfamPF127968.7E-8577648IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.487587619IPR002110Ankyrin repeat
SMARTSM002481.9E-4587616IPR002110Ankyrin repeat
SMARTSM002481100626656IPR002110Ankyrin repeat
SuperFamilySSF525408.76E-5704795IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001587705727IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.474706735IPR000048IQ motif, EF-hand binding site
SMARTSM000156.9747769IPR000048IQ motif, EF-hand binding site
SMARTSM000150.13770792IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.956771796IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 908 aa     Download sequence    Send to blast
MQPGFDINKL RREAQTRWLK PIEVLFILQN YESFQLTHKP PLKPPSGSLF LFNRRVLRNF  60
RNDGHLWRKK SNGRTLAEAH ERLKVANIEV LACYYARGEQ NQCFQRRVYW MLDPTYEHIV  120
FVHYREVAEG TFVEPIFRFS TESSPTCNQS NGITDAQVQG FPSQINDLNE GCQNSSSPVS  180
VEEVSSEFVA GKTERPYLDR MDRSETYNQP LLPDVSQALR KLEEQLSLDD DNGGGGDIYS  240
KEKLHPNCNQ NQESEHLGLL NYETRDLSQE TLDSLFDQFK HEASGYVEEA GLQDGSSTIQ  300
IVKTPECSGW SHTLLNSTSD QNSFRGIWLE QSPLKTPLAT DSGLPVAQKP WFSICEISPE  360
WAFSFESTKV IIVADFLCNP SGHSWGILFG DTKVPLEIVQ EGVFRCLTPK HDTGKVKLCI  420
TSGNGEPCSD VREFEFRSKP GTSSFSSTLH KADTMKSTEE LLLLVKFVEI LLLGHQSASV  480
LQEGGVESYF DPSRKLKINE DRFGEIAESL QTGRDTPTNT IDRIVQELLK DKLQLWLSSK  540
RVGNSDQICV LSKQEQCIIH MISGLGYDWA LSPILNSGIG INFRDPNGWT ALHWAAHFGR  600
EEMVAALLAA GASTGAVTDP TSQDPVGKTP ASLAAANGHK GLAGYLSEAA LTNHHFSLVT  660
GKSEISKESG SAEAGVETIS QKSAHLQGGT EDQLSLRDSL EAVRNAAQAA ARIQFAFRAY  720
SFRKKHQHAA TNQDKYGLSP EDIHGIKFHK AALSIQKNYW CWKGRKEFLT LRKHVVKIQA  780
RVRAHQARKK YELLLTVSIL EKIILRWSRR GVGLRGYRAE AESIDEEEEP DILEIFRKKK  840
VYAALDEAVS RVLSLVDSPK AQQQYRRMLE RYSKAKADLS KVETATASVT DDCESPQIED  900
YFDQSAWN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909834.10.0calmodulin-binding transcription activator 4 isoform X1
RefseqXP_010909835.10.0calmodulin-binding transcription activator 4 isoform X1
TrEMBLA0A2H3XYR10.0A0A2H3XYR1_PHODC; calmodulin-binding transcription activator 4-like isoform X2
STRINGXP_008790758.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-141Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains