PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909838.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 900aa    MW: 100444 Da    PI: 6.1818
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909838.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1127.36.4e-4048536117
            CG-1  36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                      gsl+L+nr+++r+fr+DG+ w+kk +g+t  E+he+LKv ++evl cyYa++e+n+ fqrr+yw+L+ ++e+iv+vhy+ev
  XP_010909838.1   4 GGSLFLFNRRVLRNFRNDGHLWRKKSNGRTLAEAHERLKVANIEVLACYYARGEQNQCFQRRVYWMLDPTYEHIVFVHYREV 85 
                     69******************************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010764.7E-33186IPR005559CG-1 DNA-binding domain
PROSITE profilePS5143754.934191IPR005559CG-1 DNA-binding domain
PfamPF038596.7E-33484IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.38E-13346429IPR014756Immunoglobulin E-set
CDDcd002042.01E-13516638No hitNo description
Gene3DG3DSA:1.25.40.209.0E-16543642IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.49E-16543644IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.149546638IPR020683Ankyrin repeat-containing domain
PfamPF127968.6E-8569640IPR020683Ankyrin repeat-containing domain
SMARTSM002481.9E-4579608IPR002110Ankyrin repeat
PROSITE profilePS5008811.487579611IPR002110Ankyrin repeat
SMARTSM002481100618648IPR002110Ankyrin repeat
SuperFamilySSF525408.5E-5696787IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001587697719IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.474698727IPR000048IQ motif, EF-hand binding site
SMARTSM000156.9739761IPR000048IQ motif, EF-hand binding site
SMARTSM000150.13762784IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.956763788IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 900 aa     Download sequence    Send to blast
MQPGGSLFLF NRRVLRNFRN DGHLWRKKSN GRTLAEAHER LKVANIEVLA CYYARGEQNQ  60
CFQRRVYWML DPTYEHIVFV HYREVAEGTF VEPIFRFSTE SSPTCNQSNG ITDAQVQGFP  120
SQINDLNEGC QNSSSPVSVE EVSSEFVAGK TERPYLDRMD RSETYNQPLL PDVSQALRKL  180
EEQLSLDDDN GGGGDIYSKE KLHPNCNQNQ ESEHLGLLNY ETRDLSQETL DSLFDQFKHE  240
ASGYVEEAGL QDGSSTIQIV KTPECSGWSH TLLNSTSDQN SFRGDSGLPT HGKDKNIHGL  300
ETVLLDENAV YSSSAFSGIW LEQSPLKTPL ATDSGLPVAQ KPWFSICEIS PEWAFSFEST  360
KVIIVADFLC NPSGHSWGIL FGDTKVPLEI VQEGVFRCLT PKHDTGKVKL CITSGNGEPC  420
SDVREFEFRS KPGTSSFSST LHKADTMKST EELLLLVKFV EILLLGHQSA SVLQEGGVES  480
YFDPSRKLKI NEDRFGEIAE SLQTGRDTPT NTIDRIVQEL LKDKLQLWLS SKRVGNSDQI  540
CVLSKQEQCI IHMISGLGYD WALSPILNSG IGINFRDPNG WTALHWAAHF GREEMVAALL  600
AAGASTGAVT DPTSQDPVGK TPASLAAANG HKGLAGYLSE AALTNHHFSL VTGKSEISKE  660
SGSAEAGVET ISQKSAHLQG GTEDQLSLRD SLEAVRNAAQ AAARIQFAFR AYSFRKKHQH  720
AATNQDKYGL SPEDIHGIKF HKAALSIQKN YWCWKGRKEF LTLRKHVVKI QARVRAHQAR  780
KKYELLLTVS ILEKIILRWS RRGVGLRGYR AEAESIDEEE EPDILEIFRK KKVYAALDEA  840
VSRVLSLVDS PKAQQQYRRM LERYSKAKAD LSKVETATAS VTDDCESPQI EDYFDQSAWN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909834.10.0calmodulin-binding transcription activator 4 isoform X1
RefseqXP_010909835.10.0calmodulin-binding transcription activator 4 isoform X1
TrEMBLA0A2H3ZQ100.0A0A2H3ZQ10_PHODC; calmodulin-binding transcription activator 4-like isoform X4
STRINGXP_008790758.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-141Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains