PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909839.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family CAMTA
Protein Properties Length: 888aa    MW: 99725.4 Da    PI: 6.5477
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909839.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1162.57.6e-51131274117
            CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 
                     e ++rwlk+ e++ iL+n+e+++lt++++ +p+sgsl+L+nr+++r+fr+DG+ w+kk +g+t  E+he+LKv ++evl cyYa++e+n+ fqrr
  XP_010909839.1  13 EaQTRWLKPIEVLFILQNYESFQLTHKPPLKPPSGSLFLFNRRVLRNFRNDGHLWRKKSNGRTLAEAHERLKVANIEVLACYYARGEQNQCFQRR 107
                     5599******************************************************************************************* PP

            CG-1  98 cywlLeeelekivlvhylev 117
                     +yw+L+ ++e+iv+vhy+ev
  XP_010909839.1 108 VYWMLDPTYEHIVFVHYREV 127
                     ******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143771.5137133IPR005559CG-1 DNA-binding domain
SMARTSM010764.1E-6410128IPR005559CG-1 DNA-binding domain
PfamPF038592.2E-4513126IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.34E-13334417IPR014756Immunoglobulin E-set
CDDcd002041.97E-13504626No hitNo description
Gene3DG3DSA:1.25.40.209.8E-16531630IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.49E-16531632IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.149534626IPR020683Ankyrin repeat-containing domain
PfamPF127968.5E-8557628IPR020683Ankyrin repeat-containing domain
SMARTSM002481.9E-4567596IPR002110Ankyrin repeat
PROSITE profilePS5008811.487567599IPR002110Ankyrin repeat
SMARTSM002481100606636IPR002110Ankyrin repeat
SuperFamilySSF525408.5E-5684775IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM0001587685707IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.474686715IPR000048IQ motif, EF-hand binding site
SMARTSM000156.9727749IPR000048IQ motif, EF-hand binding site
SMARTSM000150.13750772IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.956751776IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 888 aa     Download sequence    Send to blast
MQPGFDINKL RREAQTRWLK PIEVLFILQN YESFQLTHKP PLKPPSGSLF LFNRRVLRNF  60
RNDGHLWRKK SNGRTLAEAH ERLKVANIEV LACYYARGEQ NQCFQRRVYW MLDPTYEHIV  120
FVHYREVAEG TFVEPIFRFS TESSPTCNQS NGITDAQVQG FPSQINDLNE GCQNSSSPVS  180
VEEVSSEFVA GKTERPYLDR MDRSETYNQP LLPDVSQALR KLEEQLSLDD DNGGGGDIYS  240
KEKLHPNCNQ NQESEHLGLL NYETRDLSQE TLDSLFDQFK HEASGYVEEA GLQDGSSTIQ  300
IVKTPGIWLE QSPLKTPLAT DSGLPVAQKP WFSICEISPE WAFSFESTKV IIVADFLCNP  360
SGHSWGILFG DTKVPLEIVQ EGVFRCLTPK HDTGKVKLCI TSGNGEPCSD VREFEFRSKP  420
GTSSFSSTLH KADTMKSTEE LLLLVKFVEI LLLGHQSASV LQEGGVESYF DPSRKLKINE  480
DRFGEIAESL QTGRDTPTNT IDRIVQELLK DKLQLWLSSK RVGNSDQICV LSKQEQCIIH  540
MISGLGYDWA LSPILNSGIG INFRDPNGWT ALHWAAHFGR EEMVAALLAA GASTGAVTDP  600
TSQDPVGKTP ASLAAANGHK GLAGYLSEAA LTNHHFSLVT GKSEISKESG SAEAGVETIS  660
QKSAHLQGGT EDQLSLRDSL EAVRNAAQAA ARIQFAFRAY SFRKKHQHAA TNQDKYGLSP  720
EDIHGIKFHK AALSIQKNYW CWKGRKEFLT LRKHVVKIQA RVRAHQARKK YELLLTVSIL  780
EKIILRWSRR GVGLRGYRAE AESIDEEEEP DILEIFRKKK VYAALDEAVS RVLSLVDSPK  840
AQQQYRRMLE RYSKAKADLS KVETATASVT DDCESPQIED YFDQSAWN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909839.10.0calmodulin-binding transcription activator 4 isoform X2
TrEMBLA0A2H3XYR10.0A0A2H3XYR1_PHODC; calmodulin-binding transcription activator 4-like isoform X2
STRINGXP_008790758.10.0(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-140Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains