PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909980.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 190aa    MW: 21538.4 Da    PI: 10.5417
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909980.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57342.81.4e-1375165497
          DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 
                      r+w++ De++lL++ i f++++g+ p   +i +f++fv+ s+  ++ + +q+ +K++rL +K+ +k          + + +hd+ + el+ ++W
  XP_010909980.1  75 LRVWTDADEVALLRAAILFRDERGSLPGRsNILDFFNFVQPSLLTQIRNpEQVRSKLKRLHRKYFDKPWG-----PAASAGAHDRLVHELAGQLW 164
                     59***********************88766************999986538*************998777.....45677889999999998888 PP

          DUF573  97 g 97 
                      
  XP_010909980.1 165 S 165
                     6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.9E-1276165IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MDEHPELPQA KSKKKKKDKK QQQQPPEVPK PTTAQEHAAA DAVPSKDRRK KRKTTDPPSL  60
APAKETTSFC PRQQLRVWTD ADEVALLRAA ILFRDERGSL PGRSNILDFF NFVQPSLLTQ  120
IRNPEQVRSK LKRLHRKYFD KPWGPAASAG AHDRLVHELA GQLWSSQLET FAEKQDEASR  180
GSLESKEAGR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909980.11e-136probable transcription factor At2g01370
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26822763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.14e-08DNA-binding storekeeper protein-related transcriptional regulator