PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010910284.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

NAC

Protein Properties

Length: 353aa MW: 39427.2 Da PI: 6.0678

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010910284.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	72.1	1.5e-22	3	132	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+P+ el+ yL+ kveg++ + vi++ d y + P++L + +++ + +fF++ ++++ k + r+t +g Wk t k ++l XP_010910284.1 3 LPRGYRFDPKPWELI-GYLQDKVEGRPDAGQGVINDGiDAYGCSPKQLVgCLILHDDGRSFFFTPIKHRN--RKCRDRSTPDGHWKLTKK--TIL 92 799**********.9******99989988766******9334445556889999987764..56788899**9977..555 PP NAM 94 sk.kgelvglkktLvfykgrapkge....ktdWvmheyrl 128 ++ +g+lvg k L +++g++++g+ +t+W+m+ey+l XP_010910284.1 93 RNgEGRLVGYMKELCYFHGKRKSGKkepeRTKWLMKEYTL 132 5448999****997766555433339******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.09E-23	2	145	IPR003441	NAC domain
PROSITE profile	PS51005	25.034	3	147	IPR003441	NAC domain
Pfam	PF02365	7.4E-14	4	132	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MRLPRGYRFD PKPWELIGYL QDKVEGRPDA GQGVINDGID AYGCSPKQLV GCLILHDDGR 60 SFFFTPIKHR NRKCRDRSTP DGHWKLTKKT ILRNGEGRLV GYMKELCYFH GKRKSGKKEP 120 ERTKWLMKEY TLDHEQPKMA LCEIYSAQNK CKGRIQGNER GFQPLKLQEP IDSESEDTRF 180 YYPSNDSSSW GKATEDESHQ YLKSIAEKTG DSCDKILFMA RNLDTAGEPK FSKPEERVGP 240 NERGGFFSSK EEEGSLSAAA TSAGCLSGGD GHTGFNSVAG EMDCIQFISG FFSSQESPIV 300 HADAASKEGG SVEVVAYPDM LPNTNALDML QDSFIFGCGE MDGLLSNSHD LFY

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MRLPRGYRFD PKPWELIGYL QDKVEGRPDA GQGVINDGID AYGCSPKQLV GCLILHDDGR  60
SFFFTPIKHR NRKCRDRSTP DGHWKLTKKT ILRNGEGRLV GYMKELCYFH GKRKSGKKEP  120
ERTKWLMKEY TLDHEQPKMA LCEIYSAQNK CKGRIQGNER GFQPLKLQEP IDSESEDTRF  180
YYPSNDSSSW GKATEDESHQ YLKSIAEKTG DSCDKILFMA RNLDTAGEPK FSKPEERVGP  240
NERGGFFSSK EEEGSLSAAA TSAGCLSGGD GHTGFNSVAG EMDCIQFISG FFSSQESPIV  300
HADAASKEGG SVEVVAYPDM LPNTNALDML QDSFIFGCGE MDGLLSNSHD LFY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_029117988.1	0.0	uncharacterized protein LOC114913486

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP29419	2	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34180.1	7e-16	NAC domain containing protein 16