PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010910356.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

NAC

Protein Properties

Length: 327aa MW: 35981.9 Da PI: 5.2657

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010910356.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	84.1	2.8e-26	37	164	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lp+G+rF+P+ el+ eyL+ kveg++ + + vi++vd+y + P++L +v + +++fF++ +++ +g+ + r+t +g Wk+t k ++ XP_010910356.1 37 LPRGYRFDPKPWELI-EYLQDKVEGRPDDGQGVINDVDVYGCSPKQLVDMVGDlipcDGGSLFFFTSIEHR--NGNCRDRSTPDGHWKSTKKMTR 128 799**********.**********99***********743333344366688999988775..6889999*********** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g+lvg ++ L +++g+++ +e+t+W+m+e l XP_010910356.1 129 IRNGEGRLVGYRQDLCYFHGKKK-PERTEWLMKEHIL 164 **************88665.48*****9865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.1E-26	33	177	IPR003441	NAC domain
PROSITE profile	PS51005	28.203	37	179	IPR003441	NAC domain
Pfam	PF02365	5.6E-13	38	162	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MGMGTRPGEV VERRGAIYGG DGGGGREREG KVPVMRLPRG YRFDPKPWEL IEYLQDKVEG 60 RPDDGQGVIN DVDVYGCSPK QLVDMVGDLI PCDGGSLFFF TSIEHRNGNC RDRSTPDGHW 120 KSTKKMTRIR NGEGRLVGYR QDLCYFHGKK KPERTEWLMK EHILDHQQPK MALCEIYSAQ 180 KKCKGQIQGN EWRIQPLKDP TDSESENTQH HYSSNDWSSL GNGTEQRAGP SGGGFLSSSE 240 GFPSAPGTSA GYLSASDGYT WCNSAVDVSD LAQDSLDLYA PPALDVPSQE SPTVHADAAF 300 KEGGSAKAAA HPDMLPDINA PEMWLEN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010910356.1	0.0	uncharacterized protein LOC105036290

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP29419	2	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-16	NAC domain containing protein 28