PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010910753.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WOX
Protein Properties Length: 226aa    MW: 25415.9 Da    PI: 8.9377
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010910753.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.29e-21666257
                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+++t+eql +Lee++++  r+p+a+++++++++l    +++ ++V++WFqN++a++++
  XP_010910753.1  6 STRWCPTPEQLMILEEMYRSgVRTPTASQIQQITAHLsyygRIEGKNVFYWFQNHKARDRQ 66
                    58*****************99*************************************996 PP
2Wus_type_Homeobox121.92.7e-39567264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       ++tRW+PtpeQ++iLee+y+sG+rtP++++iq+ita+L+ yG+ie+kNVfyWFQN+kaR+rqk
     XP_010910753.1  5 PSTRWCPTPEQLMILEEMYRSGVRTPTASQIQQITAHLSYYGRIEGKNVFYWFQNHKARDRQK 67
                       589***********************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.446267IPR001356Homeobox domain
SMARTSM003892.8E-6471IPR001356Homeobox domain
CDDcd000862.12E-5567No hitNo description
PfamPF000462.3E-18666IPR001356Homeobox domain
SuperFamilySSF466891.5E-11767IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-8866IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009908Biological Processflower development
GO:0009943Biological Processadaxial/abaxial axis specification
GO:0009947Biological Processcentrolateral axis specification
GO:0010865Biological Processstipule development
GO:0048513Biological Processanimal organ development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MPQAPSTRWC PTPEQLMILE EMYRSGVRTP TASQIQQITA HLSYYGRIEG KNVFYWFQNH  60
KARDRQKLRR RLSRHHHLLF SCTHPHSLHR FQETFHPPPL PPPPPPPPLP FHHQTLPHFL  120
HHVPVNSSSS STLCHCFSGG GSQVANQGLN LLCKLETGGR EETPTTAHNM EYGYEWMAKM  180
DGGSAVPLCC RPLKTLDLFP TKSTGLKDEG STSKSSSCST STNLSP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010910753.11e-167WUSCHEL-related homeobox 3
TrEMBLA0A2H3Y9C31e-113A0A2H3Y9C3_PHODC; WUSCHEL-related homeobox 3B-like
STRINGXP_008795405.11e-113(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21773897
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.12e-38WOX family protein