PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010911718.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family NAC
Protein Properties Length: 350aa    MW: 39535.8 Da    PI: 6.7815
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010911718.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM90.82.4e-2831351128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkya...tgkrknratksgyWkatgkdk 90 
                     l pG rF+P+d el++ +L+k + g++l+  + i e+d+y  +P++L +  +++++++ewyfF+++++k++    ++r++r + +g+Wkat + k
  XP_010911718.1   3 LLPGWRFKPSDGELLDSFLRKMILGQPLSY-HRILEADVYGDDPKNLTAryNMANRDREWYFFTSTARKHPgasDSSRASRRAGAGRWKATQRIK 96 
                     579*************************99.67**************84347777899***********995444667777788*********** PP

             NAM  91 evlskkgelvglkktLvfykgrapkg..ektdWvmheyrl 128
                     +vl++++++ g k+ + + +   p+g  +k+ W+m+ey++
  XP_010911718.1  97 TVLDSDHNVLGSKQCFCYMER-CPSGgeTKSIWLMEEYSI 135
                     ******************965.4444125888******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-352164IPR003441NAC domain
PROSITE profilePS5100536.2333164IPR003441NAC domain
PfamPF023652.2E-155135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MALLPGWRFK PSDGELLDSF LRKMILGQPL SYHRILEADV YGDDPKNLTA RYNMANRDRE  60
WYFFTSTARK HPGASDSSRA SRRAGAGRWK ATQRIKTVLD SDHNVLGSKQ CFCYMERCPS  120
GGETKSIWLM EEYSIHDLRR KAGASAISGL NRLDEWVTCK IYLTPKARKA HMTEEDLHEI  180
QPVERVAQRR RMEVPQTMSS LCMHPSQDIA AHSQILQLLD DDLPQLVDMS DITINGCCPT  240
QHASVEPSIP SQDIADSFQI HQPADQRSDP IVPVPAEMMS SLCMHPNQDI VGHRQTLQLS  300
DDALPQLIDG GCSPAQYANG EPSIPGQYIT DSFRFISRPT TPYRILIQQR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-23116215163NO APICAL MERISTEM PROTEIN
1ut4_B3e-23116215163NO APICAL MERISTEM PROTEIN
1ut7_A3e-23116215163NO APICAL MERISTEM PROTEIN
1ut7_B3e-23116215163NO APICAL MERISTEM PROTEIN
3swm_A3e-23116218166NAC domain-containing protein 19
3swm_B3e-23116218166NAC domain-containing protein 19
3swm_C3e-23116218166NAC domain-containing protein 19
3swm_D3e-23116218166NAC domain-containing protein 19
3swp_A3e-23116218166NAC domain-containing protein 19
3swp_B3e-23116218166NAC domain-containing protein 19
3swp_C3e-23116218166NAC domain-containing protein 19
3swp_D3e-23116218166NAC domain-containing protein 19
4dul_A3e-23116215163NAC domain-containing protein 19
4dul_B3e-23116215163NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010911718.10.0NAC transcription factor 29-like
STRINGXP_008802265.11e-111(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2291725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-24NAC-like, activated by AP3/PI