PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010912084.1

Organism

Elaeis guineensis

Taxonomic ID

51953

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis

Family

bZIP

Protein Properties

Length: 314aa MW: 34344.1 Da PI: 9.2225

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010912084.1	genome	OG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.3	2.5e-16	251	298	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++Lkk+ e+l XP_010912084.1 251 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENEMLKKQKEHL 298 79****************************************998887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-12	247	313	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.863	249	299	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.3E-13	251	298	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.36E-24	251	301	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-15	251	299	No hit	No description
SuperFamily	SSF57959	2.31E-12	251	299	No hit	No description
PROSITE pattern	PS00036	0	254	269	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MGTRTMTSRG GGRQHSEMQS LARQGSLCRL TLNEVQSHLG EPLHSMNLDE LLRNVFPGEL 60 NQPLAMDLGS GHCGLGLGLQ CQGSISVPRA LSKKTVDEVW RDIQQKKANG ELGLSHGRQP 120 TLGEMTLEDF LVKAGVVAEG ADRRAEAHVG NVASVASGDS MAGMQGLQHQ PPPPVHWLHQ 180 YQQQQQAQQG LMGAYVGRPV PHPLGAGTGA ILDAVYYEGQ GRSLAGAMPD PQTPGRKRGA 240 AEEVTEKIVE RRQKRMIKNR ESAARSRARK QAYTNELENK ISRLEEENEM LKKQKEHLQC 300 CSVLTGVKNL MLKI

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019703046.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X3
Swissprot	Q9LES3	6e-73	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A3Q0I7W9	0.0	A0A3Q0I7W9_PHODC; ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
STRING	XP_008798530.1	0.0	(Phoenix dactylifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	9e-67	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]