PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912689.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 176aa    MW: 19705 Da    PI: 4.8332
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912689.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.4e-172169355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr +k +g+Wv+eIr+p   gk++r++lg+f +ae+Aa a++ a++ l+g
  XP_010912689.1 21 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFESAEMAAVAHDVAALHLKG 69
                    9****999.**********8...557***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.48E-302079No hitNo description
Gene3DG3DSA:3.30.730.101.3E-312078IPR001471AP2/ERF domain
SMARTSM003802.2E-372083IPR001471AP2/ERF domain
PROSITE profilePS5103223.0772077IPR001471AP2/ERF domain
PfamPF008478.5E-112069IPR001471AP2/ERF domain
PRINTSPR003675.7E-102132IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-212178IPR016177DNA-binding domain
PRINTSPR003675.7E-104359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MEMEHENKSV MEETGVRAVN YRGVRKRKWG KWVSEIREPG KKTRIWLGSF ESAEMAAVAH  60
DVAALHLKGR EARLNFPETA DQLPRPASSD PSDIRAAALE AASRFRLRPE FSGRPGPVSS  120
GSPAFERLWN DELGLESPNM WVEMAEAMLL DPPAWSNDTG DQAEDWSQGS LWDPSV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-162077260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A2e-162077563ATERF1
3gcc_A2e-162077563ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00227DAPTransfer from AT1G71450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912689.11e-125ethylene-responsive transcription factor ERF022
SwissprotQ9C9I23e-37ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A2H3Y9491e-96A0A2H3Y949_PHODC; ethylene-responsive transcription factor ERF038-like
STRINGXP_008795312.12e-97(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.15e-31ERF family protein