PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912775.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 413aa    MW: 45156.2 Da    PI: 6.3513
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912775.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.6e-10227285563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l +l+     l++e+
  XP_010912775.1 227 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATTLSTQLTMLQRDTNGLTAEN 285
                     9**********************************************999888777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-16223287IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.955225288IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-10227281No hitNo description
SuperFamilySSF579596.05E-11227278No hitNo description
PfamPF001707.1E-9227282IPR004827Basic-leucine zipper domain
CDDcd147031.44E-22228277No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MEKEKSPVHG GGSAGGGLPP PLPRYAALAS LSNSFPLKGE ASSSSSIPGR TPDSGHFGQR  60
VVPDIGQFSH DISRMPEHPP RNVGHRRAQS EILSLPDDIS FDNDLGVVGA GEGPSLSDET  120
EEDLLSMYLD MDKLTSSSAT SELDLRGSEK SATAAVPAPS FPLQTENSAS ASHEKPRVRH  180
QHSQSMDGST SIEPEILASG SEGPSLAETK KVMSAAELAD LALVDPKRAK RIWANRQSAA  240
RSKERKMRYI AELERKVQTL QTEATTLSTQ LTMLQRDTNG LTAENNELKL RLQTMEQQVH  300
LQDALNDALR EEVQRLKIAT GQAIPNGGQI MNFGPSFGTT QQYYHQSHAM QSLLAARQLQ  360
QLQIHSQHQQ QMHPQQHQPQ VQQQQQQSPA ELKMKGVMTS QRESTSDNIT SQE
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912775.10.0transcription factor RF2a
SwissprotQ040881e-132POF21_ARATH; Probable transcription factor PosF21
TrEMBLA0A2H3Y1700.0A0A2H3Y170_PHODC; transcription factor RF2a-like isoform X1
STRINGXP_008791799.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP42693868
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-134bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]