PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912931.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family WRKY
Protein Properties Length: 202aa    MW: 22536.4 Da    PI: 8.9783
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912931.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY894e-28126184159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDg++Wr+ G+K vk+s++pr YYrC+++gC vkk+v+r++edp++v++tYeg+Hnh 
  XP_010912931.1 126 LDDGFKWRRNGKKYVKNSPYPRTYYRCSTEGCLVKKRVQRDKEDPSYVITTYEGTHNHM 184
                     59********************************************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-30113186IPR003657WRKY domain
SuperFamilySSF1182905.62E-26119185IPR003657WRKY domain
PROSITE profilePS5081129.195121186IPR003657WRKY domain
SMARTSM007742.2E-28126185IPR003657WRKY domain
PfamPF031068.9E-23127183IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MKESLKVPIW VLVNALNVAF AYRVSQMMPL AWLYHPSKAL QEGGLAYDDP QSNQPTAFHP  60
SVLDEGLTPA SFGHPENAVP PMVDAGQTAN QIISGSNLAT SSRSTKRSGV ESPTIAFRTE  120
SEVEILDDGF KWRRNGKKYV KNSPYPRTYY RCSTEGCLVK KRVQRDKEDP SYVITTYEGT  180
HNHMNPGVAT QPKIGRLQLH ET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-25112186377Probable WRKY transcription factor 4
2lex_A5e-25112186377Probable WRKY transcription factor 4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008810071.13e-67probable WRKY transcription factor 50
TrEMBLA0A2H3Z8M98e-66A0A2H3Z8M9_PHODC; probable WRKY transcription factor 50
STRINGXP_008810071.11e-66(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44137206
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.11e-37WRKY DNA-binding protein 50