PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913080.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 231aa    MW: 26255.4 Da    PI: 9.9071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913080.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.31.4e-11109150351
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                      +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  XP_010913080.1 109 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 150
                     59**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.87384163IPR001471AP2/ERF domain
SMARTSM003801.8E-4108165IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-8108153IPR016177DNA-binding domain
PfamPF008478.3E-6109151IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-6111155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVSIRRRRYL GLCTGKSSVP VELPKPAENG NAVENPNQNV KPFSVHPMPS DNLRLQKPIN  60
ISEAFPGSSN ASGSSSSKEE ANHYYPGKQI KRRKRHRRKH YEDQEPCMMR GVYFKNMKWQ  120
AAIKVDKKQI HLGTVGSQEE AARLYDRAAF MCGREPNFEL SEEEKKELGQ YNWDEFLEMT  180
RNAINNKKHQ KRLGAGRQKK PESQLQSSDG EHERGIHGSS VSDNGDADTS V
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913077.11e-174ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_010913078.11e-174ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_010913081.11e-174ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_029118497.11e-174ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A2H3Z9T71e-137A0A2H3Z9T7_PHODC; ethylene-responsive transcription factor-like protein At4g13040
STRINGXP_008810643.11e-138(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-48ERF family protein