PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913729.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 236aa    MW: 26751.4 Da    PI: 4.2957
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913729.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.6e-115799855
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +Er+RR+++ +++  Lr+++P+      +K++ a+i + A++YI++Lq
  XP_010913729.1 57 MERNRRKKVQEKLYALRSVVPNI-----TKMDRASIIKDAIDYIQQLQ 99
                    8*********************7.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.6844998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1654117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-1455104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-1556113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.17E-1256103No hitNo description
PfamPF000107.3E-95799IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2605.1E-4163232No hitNo description
SuperFamilySSF550215.34E-6163232No hitNo description
PROSITE profilePS5167111.144165236IPR002912ACT domain
CDDcd021164.01E-4166230No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MDAMDCEYKN YWETKTFLEA EELHSSSWII DEAMSQCFSC SSSLAATSST PPKYLVMERN  60
RRKKVQEKLY ALRSVVPNIT KMDRASIIKD AIDYIQQLQE QEKMLLSEIS ELELFNEFTE  120
IIYDMEQDDV AQTSPEQPLA PGSPFMPSIE LLELKVFAVG NKNFSISFTC NKKRDALIKM  180
CEVFASLNLN IITANITSSS ESLSHMLFIE TDESDGSGLK EKIEAAIAEL DVPRNP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913729.11e-174transcription factor bHLH35 isoform X1
TrEMBLA0A3Q0HXI31e-122A0A3Q0HXI3_PHODC; transcription factor bHLH35-like isoform X1
STRINGXP_008781924.11e-120(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP104438133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.15e-58bHLH family protein