PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913767.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 279aa    MW: 30841.9 Da    PI: 9.6173
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913767.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.7e-19112162256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r+r++lg++++ae Aa a+++a+ kl+ge
  XP_010913767.1 112 LYRGVRQRH-WGKWVAEIRLPQN---RRRVWLGTYDSAESAAYAYDRAAYKLRGE 162
                     59******9.**********954...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.33E-21111171No hitNo description
Gene3DG3DSA:3.30.730.101.7E-30112170IPR001471AP2/ERF domain
SMARTSM003802.4E-34112175IPR001471AP2/ERF domain
PROSITE profilePS5103223.156112169IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-22112169IPR016177DNA-binding domain
PRINTSPR003671.1E-12113124IPR001471AP2/ERF domain
PfamPF008475.1E-14113162IPR001471AP2/ERF domain
PRINTSPR003671.1E-12151171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MEGRVAEKMD RTLESLPPAG FPGQISSALS EILLSGTDPL DSIFSHLPPP ALATPETLGS  60
GVYLRQTELL RRIASQSRIY SVAFPSAPAW AAAAADQHHR LYYGMGPAKK KLYRGVRQRH  120
WGKWVAEIRL PQNRRRVWLG TYDSAESAAY AYDRAAYKLR GEYARLNFPE LRDGGDCPEK  180
LRALRSAVDS KIQAICQRLG RQRTSKQRSE TEKGKAKGKS RRDKEPLAAA AAEGSSETTS  240
TSVLEEGRMT AGCNEMNNEC SLAGMPSFDP ELIWEVLAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-19108169163ATERF1
3gcc_A2e-19108169163ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913767.10.0ethylene-responsive transcription factor ERF061
SwissprotQ9C7W22e-47ERF61_ARATH; Ethylene-responsive transcription factor ERF061
TrEMBLA0A2H3WZV21e-145A0A2H3WZV2_PHODC; ethylene-responsive transcription factor ERF061-like
STRINGXP_008776202.11e-145(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88282842
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.11e-40ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]