PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913796.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 303aa    MW: 33892.9 Da    PI: 4.5518
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913796.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.21.2e-1464133271
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                     Wt +e l+L+     ++e+  ++ +  ++W+ +s+++++  + rs++qCk kwe+l  +y++i+++e+++
  XP_010913796.1  64 WTTHEMLVLVSEIAAVDEDWVKALSLYQKWKMISDNCMAFDVIRSSNQCKRKWESLLADYRRIRDWESRH 133
                     ***********************9*******************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.0E-1063165No hitNo description
PROSITE profilePS500907.13164120IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MERTETPCIV QALPASNKKD KESLTKPVTV EDKESPSKLE ITTYNSPQTP SSSRFTRSQA  60
APDWTTHEML VLVSEIAAVD EDWVKALSLY QKWKMISDNC MAFDVIRSSN QCKRKWESLL  120
ADYRRIRDWE SRHGVGSYWC LEGEKRKQFG LPAFFDEEVF DSMDAVIKAQ ETQSGSGDSD  180
SEGLIGKADV QMTDGDADLG PEEKEPIETL TNTDKARDMA MKLQDDAQHI HAILKGELEG  240
SASQVRAPVD LTKPNAMETE FTRRQANELI KAFGSLVSTL NQFTELIKDG ECEGIKPVTS  300
TAQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010913796.10.0trihelix transcription factor ASR3
TrEMBLA0A2H3XCL40.0A0A2H3XCL4_PHODC; uncharacterized protein LOC103701445 isoform X1
STRINGXP_008781712.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63532433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.13e-45sequence-specific DNA binding transcription factors