PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010913949.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 432aa    MW: 48476.2 Da    PI: 4.6748
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010913949.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.31e-18113195172
        trihelix   1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                     +Wt++ v++Li+++  ++++  +++           +kk++W+ vs  m+e g ++sp+qC++k+++lnkryk+++++ + +t
  XP_010913949.1 113 KWTDEVVRLLIRIVAFVGDDCAQEAvdgkrkhgaafQKKGKWKMVSLLMQENGASVSPQQCEDKFNDLNKRYKRLNDILGPGT 195
                     7**************777777665444556667788*****************************************998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.3E-17111241No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MLETRPRGRA EAKDTSMTSS GFVSGSSADP SVHHLPQAHH PLHNLQPMLA AGLFDPATAS  60
LNPPLRGKGI SPSATATSDD DDPLPGAAVQ ENGHEQQTGT GPGKKGSPWQ RMKWTDEVVR  120
LLIRIVAFVG DDCAQEAVDG KRKHGAAFQK KGKWKMVSLL MQENGASVSP QQCEDKFNDL  180
NKRYKRLNDI LGPGTSCXXX XXXXLVSDPA SLESMPISQK AKSDVKKILS SKHLFYKEMC  240
AYHSGQKIPD CPDINLQSCS LPQAASSKDG NQCVDGEEEE EEEEEEEDEA DHDEGDEEEG  300
SEEVERGSFE SFLAELDAVL QDPMRSPLEQ QEWLRMRALQ LGEERLDIET EALAIERQRL  360
KWQRFSSKKD REIERSRLEN ERLMLENERM MMQMRQKELE LHFKRSGDSL ESAGFGTEEE  420
QGREQMELGR VH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008798770.10.0uncharacterized protein LOC103713568
TrEMBLA0A2H3YH850.0A0A2H3YH85_PHODC; uncharacterized protein LOC103713568
STRINGXP_008798770.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1947058
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.14e-50sequence-specific DNA binding transcription factors