PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915510.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Trihelix
Protein Properties Length: 315aa    MW: 35159.6 Da    PI: 10.4569
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915510.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix539e-1721110187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     +W++  + aLiea  ++  +l+rg+l++++W+ev++++     ++r   r+ +qCk++++ l+k+yk +k+   +++  ++s +p++ +l+a
  XP_010915510.1  21 CWSEGATAALIEAWGDRYVELNRGNLRQKHWQEVADAVnsrrgAARRPPRTDVQCKNRIDTLKKKYKTEKAKIADGA--VESPWPFYPRLDA 110
                     7*************************************98766666667889***********************84..5556******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.9E-2719111No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MEGRETKPPP PNPAMPYRED CWSEGATAAL IEAWGDRYVE LNRGNLRQKH WQEVADAVNS  60
RRGAARRPPR TDVQCKNRID TLKKKYKTEK AKIADGAVES PWPFYPRLDA LIGDSFPAKK  120
PXPSHPPSPP LALPLPFHRK GSPLPAAAAA AAAAAAAARP LDSKEKRPAA TALPVDDAFF  180
RRNYSAAAAA AAERESESSS RSSVERSRSS RERIARGLKR RREGYGEGFR QLARAILRLG  240
EIYEKIEEEK QQQMIDLEKQ RMEFAKGLEF QRMQIFVDSQ VQLEKIKRSK RVDAGEHGSS  300
SGAIHFLFGS PVFNV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215220RGLKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008776406.11e-129trihelix transcription factor ASIL2-like
TrEMBLA0A2H3X0B21e-128A0A2H3X0B2_PHODC; trihelix transcription factor ASIL2-like
STRINGXP_008775691.11e-140(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20653279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.17e-35sequence-specific DNA binding transcription factors