PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915710.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 336aa    MW: 36854.9 Da    PI: 6.1755
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915710.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.7e-19117166255
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeIrd +     r  r++lg++ taeeAak ++ a+ +l+g
  XP_010915710.1 117 KFRGVRRRP-WGKYAAEIRDpW-----RrVRVWLGTYNTAEEAAKVYDSAAIQLRG 166
                     89*******.**********88.....55*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.8E-28116174IPR001471AP2/ERF domain
PfamPF008471.3E-11117166IPR001471AP2/ERF domain
PROSITE profilePS5103222.866117174IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-20117175IPR016177DNA-binding domain
SMARTSM003809.5E-34117180IPR001471AP2/ERF domain
CDDcd000186.15E-29117173No hitNo description
PRINTSPR003671.9E-9118129IPR001471AP2/ERF domain
PRINTSPR003671.9E-9140156IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MDGMHWSTVK RSDHVNLIQK RFEPNRSSAA AGWQTVRIFC DDYEATDSSG DEEEGCYFRR  60
RVKRYVQEIR FQDHSARGAA GAASTGDKGK SVKAGGKKKK PPAAAAAGRP GSPAARKFRG  120
VRRRPWGKYA AEIRDPWRRV RVWLGTYNTA EEAAKVYDSA AIQLRGPDAT TNFSTRPVSA  180
APAQPPPPPR NLSDGNLPSI SGGYDSGDES HNLSSPTSVL RGFSSSAEVE EPQDRQKTPT  240
NVSDEKGGLV TAGVGLPDEF QDFMPFEKVP LYNDFLDFSL SEPRIFEDTT QINFFANNLS  300
DVMLSSDVKL GLSPLQGDDF FQDIGDLFPI DPLSAI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-171171731471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915710.10.0ethylene-responsive transcription factor CRF2-like
TrEMBLA0A2H3XHQ00.0A0A2H3XHQ0_PHODC; ethylene-responsive transcription factor CRF1-like
STRINGXP_008783954.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-40cytokinin response factor 4