PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010915977.1
Organism
Elaeis guineensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 229aa    MW: 24956.9 Da    PI: 6.7853
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010915977.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-1963114156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     + y+G+r ++ +grWv+eIr+p++   + r++lg+f t+e+Aa+a++ a+++l+g+
  XP_010915977.1  63 PVYRGIRKRR-WGRWVSEIREPRK---KSRIWLGSFPTPEMAARAYDVAAQCLKGH 114
                     68*****887.**********843...6*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-1363114IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-3164123IPR001471AP2/ERF domain
PROSITE profilePS5103223.64464121IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-2164122IPR016177DNA-binding domain
SMARTSM003801.8E-3464127IPR001471AP2/ERF domain
PRINTSPR003671.6E-96576IPR001471AP2/ERF domain
CDDcd000184.72E-3065123No hitNo description
PRINTSPR003671.6E-987103IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MIAFSSNPTC LISSMTDSAT YEGDAGGEQL RSVKEPSPNY VPSAKEQRQA ASDPNSGGGM  60
RHPVYRGIRK RRWGRWVSEI REPRKKSRIW LGSFPTPEMA ARAYDVAAQC LKGHKALLNF  120
PDQAHLLPQP STSSPKDIQA AAIAAARLDL LPSTSASTST LEEEEEEVVM AKSPRRGKNE  180
EEDFWASVEL SALKSTAKSS ATIGETWPWN LWGCSSDAAS LDGQSVSLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1857126777Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00120DAPTransfer from AT1G01250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010915977.11e-168ethylene-responsive transcription factor ERF023 isoform X1
SwissprotQ1ECI23e-42ERF23_ARATH; Ethylene-responsive transcription factor ERF023
TrEMBLA0A2H3XFX04e-97A0A2H3XFX0_PHODC; ethylene-responsive transcription factor ERF023-like
STRINGXP_008783177.17e-98(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP15935354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01250.12e-42ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]